Gadus morhua (Atlantic cod): 115560684
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Entry
115560684 CDS
T10832
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115560684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115560684
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115560684
Protein recycling
Other Rab GTPase associated proteins
115560684
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
115560684
NCBI-ProteinID:
XP_030236033
Ensembl:
ENSGMOG00000035960
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All DBs
Position
16:2645439..2653906
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AA seq
501 aa
AA seq
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MTTQRFERSGIHLDQSELLCTKGCGFYGNAAWRGLCSKCWRDENQKDKQTQIQEDWALAE
RLQKEEEVAYASTHQTAPTQPPASGRREEKKPKEKASKVKTVAKLFSTSTKTPPKKDHIS
GEAAPGSSGGPRHGPPDPDQATRDFIDFLKPLRPGREIFKQCRAFTESMFYKRELGVEEL
SECVQDFYQKLSDYLHTQFKGSSEQVESVMDEVERYMMSRLYEGVFCPESTDDEDKDLAI
QKRIRALHWVTMEMLCVPVDEEIPEVSDSVVKAITDVIEMDSRRVPQQKLACITRCSKHI
FSAIRATKGEPASADDFLPALIYTVLKANPPRLQSNIQYITRFCSPSRIMSGEDGYYFTN
LCCAVAFIEKLDGRSLNMSSEDFELHMSGQTPAPPRPPAPPPSLQQVQSGLDLLTGLGVR
QERVMEGARRLESDLIDWSQDVEHRVHGALGGPPLEAEGPPPATEGPPPATEAPPAPSAI
DADNVENDLLPPPLLPQLFAG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcagaggtttgaacgcagtggcatccacctggaccaatcggaactgctgtgc
accaagggatgtgggttctacggcaacgcagcctggagaggcctgtgttcaaaatgctgg
agagacgagaaccagaaagacaaacagactcagattcaggaagactgggcccttgcagag
aggttgcagaaagaggaggaggtggcctacgccagcacccaccagacggccccgacgcag
cctcccgcctcgggcaggcgggaggaaaagaaacccaaggaaaaggccagtaaagtcaaa
acggtcgcaaaactgttcagcacctccacaaaaacaccgcccaaaaaagatcacatctcg
ggggaggcggcgcccggctcctcggggggtccccgccacggccccccggaccccgaccaa
gccacgcgggacttcatcgacttcctgaagcccctgagaccgggccgcgagatcttcaag
cagtgccgagcgttcacggagagcatgttctacaagagggaactgggtgttgaggagctc
tctgaatgtgtccaggatttctaccagaaactttctgactacctccacactcagttcaaa
ggttcgtcggagcaggtggagagtgtgatggacgaggtggaacggtacatgatgagccgt
ctctacgagggcgtcttctgccccgagtccaccgacgacgaggacaaagacctggccatc
cagaagaggatcagggccttgcactgggtcaccatggagatgctgtgcgtccccgtggac
gaggagattcccgaggtgtcggacagcgtggtcaaagccatcacagacgtgatcgagatg
gactcccggcgcgtcccgcagcagaagctggcctgcatcacgcgctgcagtaagcacatc
ttcagcgccatccgggccaccaagggggagccggcgtcggccgacgacttcctgcccgcg
ctcatctacacggtgctgaaggccaaccccccgcggctgcagtccaacatccagtacatc
acgcgcttctgcagccccagccgcatcatgagcggagaggacggatactacttcaccaac
ctgtgctgcgctgtggccttcatcgagaagctggacggccgctccctcaacatgagctcc
gaggactttgagctccacatgtcgggccagaccccggcccccccgcggcccccggccccc
cccccctcactgcagcaggtccagagcggcctggacctgctgaccggcctgggggtccgc
caggagcgcgtcatggagggggcccgccggctggagagcgacctcatcgactggagccag
gacgtggagcacagggtgcacggcgccctgggggggccccccctggaggccgagggcccg
cccccggcgaccgagggcccgcccccggcgaccgaggccccgcccgcaccgtcggccatc
gacgccgacaacgtggagaacgacctcctgccgccgccgctgctgccacagctgttcgcc
gggtga
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