Gadus morhua (Atlantic cod): 115560708
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Entry
115560708 CDS
T10832
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115560708 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115560708 (snrpa)
Spliceosome [BR:
gmh03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
115560708 (snrpa)
Complex B
115560708 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
115560708
NCBI-ProteinID:
XP_030236088
Ensembl:
ENSGMOG00000010128
UniProt:
A0A8C4ZCN4
LinkDB
All DBs
Position
16:complement(2197111..2200385)
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AA seq
282 aa
AA seq
DB search
MAAPDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVAINLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKLDSDIIAKMKGTFVERDRKKEKRKVKGAEGPG
GKKGVPGAAVALGPGGAGAMPGMPPMSQAPRMMAMPGQPPYMPPPGMMPPPGMAPGQMPP
GSMPPGQMMPGQMPGQMPQQIAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNDVQAGAARDALQGFKITQTNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccggacgtgcgactcaaccatactatctacatcaacaacctgaacgagaag
atcaagaaagatgagttgaagaagtccctgtacgccatcttctcgcagttcgggcagatc
ctggacattctggtggcaataaacctgaagatgaaggggcaggcctttgtgatcttcaag
gaggtcaacagcgcctccaacgcgctgcggtcgatgcagggattccccttctacgacaaa
cccatgcgaatccagtacgccaaactagactctgacatcatcgccaagatgaaggggacc
ttcgtggagcgggaccgcaagaaggagaagagaaaggtcaagggggcagagggccccggg
ggcaagaagggcgtgccgggggccgccgtggccctgggccccgggggagccggtgccatg
ccggggatgcctcccatgagccaggcaccacgcatgatggccatgcccggccagccaccc
tatatgcctcccccagggatgatgcctccgcctgggatggcccctggccagatgccccct
gggtccatgcccccgggccagatgatgcccggacagatgcctggtcagatgccgcagcag
atcgcggagaaccctcccaaccacatcctgttcctcaccaacctgccggaggagaccaac
gagctcatgctgtccatgctcttcaaccagttcccgggcttcaaggaggtgcgtttggtc
cctgggcgccacgacatcgccttcgtggagtttgataacgacgtgcaggcgggggccgcc
agagacgccctgcagggcttcaagatcacgcagaccaacgccatgaagatctccttcgcc
aagaagtag
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