KEGG   Gadus morhua (Atlantic cod): 115560962
Entry
115560962         CDS       T10832                                 
Symbol
itgav
Name
(RefSeq) integrin alpha-V isoform X1
  KO
K06487  integrin alpha V
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04081  Hormone signaling
gmh04145  Phagocytosis
gmh04148  Efferocytosis
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04514  Cell adhesion molecule (CAM) interaction
gmh04518  Integrin signaling
gmh04810  Regulation of actin cytoskeleton
gmh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    115560962 (itgav)
   04512 ECM-receptor interaction
    115560962 (itgav)
   04514 Cell adhesion molecule (CAM) interaction
    115560962 (itgav)
   04518 Integrin signaling
    115560962 (itgav)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115560962 (itgav)
   04148 Efferocytosis
    115560962 (itgav)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115560962 (itgav)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115560962 (itgav)
   04810 Regulation of actin cytoskeleton
    115560962 (itgav)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115560962 (itgav)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115560962 (itgav)
   04515 Cell adhesion molecules [BR:gmh04515]
    115560962 (itgav)
   04090 CD molecules [BR:gmh04090]
    115560962 (itgav)
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115560962 (itgav)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115560962 (itgav)
  Exosomal proteins of epithelial cells
   115560962 (itgav)
Cell adhesion molecules [BR:gmh04515]
 Integrins
  Integrin alpha subunits
   115560962 (itgav)
CD molecules [BR:gmh04090]
 Proteins
  115560962 (itgav)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 115560962
NCBI-ProteinID: XP_030236518
Ensembl: ENSGMOG00000015747
UniProt: A0A8C4ZN30
LinkDB
Position
16:32214918..32275778
AA seq 1036 aa
MARLWLAVVLTSGMLQFCFSFNLDVENPAVFSGPEGSYFGFSVDFFKTANNQKSDVLVGA
PRANTTEDSAVVERGAVYSCPWSSAACEQLHFDSTDNRKSAEGVQMEFKSRQWFGASVRS
DGEHILACAPLYQWSTYSYAEREPVGTCFLKKGEAVVEYSPCRSTEASPEGQGFCQAGFS
ADFLKNNTRVVVGGPGSFYWQGQLISDDVSEVFTRFDQKNFKTSYANTLATKSASAQYDD
SYLGYSVTVGDFNKDGREDFITGVPRGNNALGYVNIFNGLNMQSMINFTGAQMAAYFGHS
VVASDVNNDGTVDLLVGAPLFMGRGSDGKLREVGQVSVYLGRGGFSFRPAQTLTGSEIYA
RYGSAIAALGDLDMDGYNDVAVSSPYGGPKQHGLVYIHNGGPGGPSPSASQVLQGVWASS
YMPASFGYAITGNTDIDRNGYPDLIVGVFGADKAVLYRARPVIGVNATLDITPQILNAEE
KSCILPGTSTKVSCFRVKYCLEAGGMGAPAILSFRVDLVLDRLKHKEATKRVLFLHSGAF
QYAKNMSVSNRLGFACEELEAYLKDEGEFQDKITPISVVMEFSLDYKLAADSTGLLPILG
MKAPSNLTKQAHILLDCGEDNICKPDLRLSVKSDRKQLYIGDDNELTLEISAENWGEGAY
EAELRVFPPPQADYTTVVRSQALSRLSCNSKKDNETRVVVCELGNPMKGGAKVLAELRFS
VHQLSEHDTFVQFDLQIFSSNQFNNRSPLVSSRTNLTVLAKVNIRGASIPDQVLLPIADW
KPRNPPVSGDDIGPQILHIYELRNSGPSAFSKAMLVVDWPYLYGNGSLLDIISYDVDGPI
NCTTDVEINTFNVSKTVSLEKPGDRGNEGRQPNHVHKRALEEPRPQDHLQILDCTTASCL
KLRCQVGRLERNQGATLFIYSRLAVNNFLRAENQNKSYTVRSSASFSVIEMPYKKLVSEM
PSNSTTLSVSVLWLTDKPPPVPGWIVALAVLAGLLLLALLIFIMYKVGFFKRVRPPQEDC
TEKEQLQPEENGNADA
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggctcggctctggttggcggttgtcctcacgtctgggatgcttcagttctgtttctcc
tttaatctggacgtggaaaaccccgccgtgttctctggaccagaggggagctacttcggc
ttctcggtggacttcttcaagaccgccaacaaccagaagtcagacgtgttggtaggggct
ccaagggctaacaccacggaggacagcgctgtggtggagcgaggggcggtgtacagctgt
ccctggagctctgcagcctgcgagcagctccacttcgacagcacagacaacaggaagtct
gctgaaggagtacagatggagtttaagtccaggcagtggttcggagcgtcggtccgttcg
gacggggagcacatcctggcctgtgctcctctgtaccagtggtcaacctacagctatgca
gagagagagccggtgggaacgtgcttcctgaagaaaggagaagcagtggtggagtactct
ccctgccgatccaccgaggcctctcctgaaggccaggggttctgccaggctggtttcagt
gcagacttcctcaagaacaatacaagagtggtggtcggaggcccaggcagcttctactgg
cagggtcagctgatctctgatgatgtgtcagaggtcttcactcgctttgaccagaaaaac
tttaagactagctatgcgaacacactggctaccaagtcagccagcgcccagtacgatgac
agttacctagggtactctgtgactgttggagacttcaacaaagacggacgagaggacttc
atcactggggtgccgagagggaacaatgcactaggatacgtgaacatctttaatggtctc
aacatgcagtccatgatcaacttcactggagcccagatggcggcctactttggccactct
gtagttgcttctgatgtcaacaacgatgggactgtggatctgttggtgggagctcctctc
ttcatgggccgaggctcggatggcaaactgagggaggtggggcaggtgtctgtgtacctg
gggagaggtggtttctccttccgtcccgcccagacgctgactggctccgagatctatgcc
cgctacggctcagccatcgcggccctcggagacctggacatggacggatacaacgatgtg
gcggtgtcatccccttacgggggtcccaagcagcatgggctggtctacatccataacgga
ggccccgggggtccctccccctctgcctcacaggtcctgcagggtgtttgggcgtccagc
tacatgcctgctagctttggctacgcgataactggcaacactgatatagaccgaaacgga
tacccagatcttatagttggagtgtttggggcggacaaggctgttttatacagggctcgt
cctgtcatcggtgtgaatgccaccctggacatcactcctcagatcctcaacgcagaagaa
aagagctgtatcctccctggaactagcaccaaggtgtcctgttttagggtgaagtactgc
cttgaggccggcgggatgggagctccagccatcctgagtttcagggtggacctggttctg
gaccgtctgaaacacaaggaggccaccaagcgagtcctgttcctccacagcggagccttc
cagtacgcaaagaacatgagcgtgtccaaccgccttgggtttgcctgcgaggagctggag
gcctacctcaaagatgagggggagttccaggataagatcactcccatctccgtcgtgatg
gagttcagtctggactacaagctggcagcggacagcaccggcctgctgccaatcctgggc
atgaaggctccttccaacctcaccaaacaggctcacatcttgctggactgtggtgaagac
aacatctgtaagcccgacctcaggctgtctgtgaagagcgacaggaagcagctgtacatc
ggcgacgacaacgagctgaccctggagatcagcgcagagaactggggggagggggcgtac
gaggccgagctacgcgtctttccgcccccccaggccgactacaccacggtggtccgcagc
caggctctatccaggctgtcgtgtaactccaagaaggataacgagaccagagtggtggtg
tgtgagctgggaaaccccatgaagggaggagccaaggtcctggcggagctgcgcttcagt
gtccaccagctgtcagaacatgacaccttcgtccagtttgacctgcagatcttcagctcc
aaccagttcaacaaccgtagcccactggtatccagcaggaccaacctgactgtgctggcc
aaggtcaacatcagaggcgcgtctattccagaccaggtgttgttaccaatagccgactgg
aagcccagaaaccccccggtgtcaggagacgacatcggaccccagatactacacatatac
gagcttcgcaacagtggtcccagtgcattcagtaaggccatgctggtggtggactggcca
tatctctatggcaacggctctctgcttgacatcatttcctatgacgtcgacggaccaatc
aactgcaccacagatgtggagataaacaccttcaacgtgtccaagacggtctccttggag
aagcctggagaccgagggaacgagggccggcagccaaaccacgtccacaagagggccctg
gaggagccccggccccaggaccacctgcagatcctggactgcaccactgcatcatgcctg
aagctgcgttgccaggttggccgcctggagcgaaaccagggtgcgacgctgttcatctac
tcaagactggccgtcaacaacttcctcagggcagagaaccagaacaagtcctacacggtg
aggtcttcagcctcctttagtgtgatcgagatgccgtacaagaagctggtgtctgagatg
ccctccaacagcaccaccttgagcgtctcggtgctctggttgactgacaagccccccccc
gtcccgggctggatcgtagcgcttgctgtcctggccggactcctgctgttggccctgctc
atcttcatcatgtacaaggtgggtttcttcaagagggtgcgacccccgcaggaggactgt
acggagaaggagcagctgcagccggaggagaacggcaacgccgatgcctag

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