Gadus morhua (Atlantic cod): 115561021
Help
Entry
115561021 CDS
T10832
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115561021 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115561021 (dhx36)
03012 Translation factors [BR:
gmh03012
]
115561021 (dhx36)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115561021 (dhx36)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115561021 (dhx36)
Translation factors [BR:
gmh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115561021 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
115561021
NCBI-ProteinID:
XP_030236653
Ensembl:
ENSGMOG00000013947
LinkDB
All DBs
Position
16:complement(11700041..11729553)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSYGYGGGGGGRRGRGRGGRGYGDGSRDRWDRGGGRGSRGSDLGSQDDQERGGGQKDRPP
PHLKGRDIGMWYARFGAVRRKQADRRSRPLVQMDEAREQQITNLLNSVKSEPPGASRDGC
DLRATTSNSWRATPSGGANSHCYFDGEEEEEELNVDVKSEELVEDIGGSGKSKARQSNRP
ISQRVVKDEPPDAWDGDEEEEEVKKVKVVVKPQVKPQVKVQGKEKDLEYLFQEVQRDESL
DEFLMKDLQSKRMEPKYQEMLIFRERLPSYSKRHELVDLISSSRVVVVSGETGCGKTTQV
TQFILDDYITRGVGSLCRVVCTQPRRISAISVAERVSAERAETVGNGNSCGYQIRLQSRL
PRKQGSVLYCTTGIILQWLRSDQTLSTISHLVLDEIHERNLQSDVLLVIVRDLLAVRPDL
KVILMSATLNAEKFSKYFGNCPMIHIPGLAFPVEEFLLEDVVEMIGYRPKTQNQRPSWKK
GFMQGRNSRPEKEEKEAEYKESWPCYARTLQDRYSESTIEVLEMLDNDEKIDLELILALI
RHIVLQEEEGAILVFLPGWDNISGLNDLLMAQQMFKSDRFVIIPLHSLMPTVNQTQVFKR
PPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSLANAKQR
KGRAGRVRPGKCYHLYNKLRASLLDAYQLPEIMRTPLEELCLQIKILDLGAIADFLSRAL
DPPTEEAVSLAIKHLVDLNALDQSETLTSLGVHLARLPVEPHIGKLILFGALLGCLDPVL
TIAASLSFKDPFFIPMGKEKMADMKRRTLSRNSKSDHLTIVNAVQGWEEAKRRGQRYERE
FCWENFLSANTLQMLHNMKGQFAEHLMKVGFVSSKDPKDPKANVNSENEKLMKAVIVAGL
YPKVAMIKPSHSKKWKGSKVYTQADGKVVIHPKSVNAEENQFNYTWLVYHLKMRTTSIFL
YDCTEVSPFSLLFFGGNVSIQKDEGQETIAVDQWIVFRSPERIAHLVKSLKRELDVLLEE
KIRNPAPVDWNNRESKDCAVITAIIDLITTQEKGATGGYQGEGSGYQADGYQAERSGYQA
ERSGYHGGGAGYQGGGAGYQGGGAGYQGGGAGYQAERSGYKADGYNRRLGNAPRGPRLVF
KDDDDDDDDD
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggctatggcggtggcggtgggggaagaagaggccgaggtagagggggtcgg
ggatacggggacggtagccgagacagatgggacagaggaggtggaagggggtccaggggc
tctgacctgggctctcaggatgaccaggagcggggcggaggacaaaaagaccgaccccct
ccgcatctgaagggtcgggacattggcatgtggtacgcgaggtttggagccgttagaaga
aaacaagctgatcgaagatcgcggccattagtgcaaatggacgaagccagggagcagcag
atcaccaatcttctgaattcagtcaaaagcgaaccccctggtgctagcagagacggatgt
gatctccgagccaccacgtccaacagttggcgtgctactcccagtggtggtgctaatagt
cattgttactttgatggggaagaagaagaagaggaattgaatgttgacgtgaaatcagag
gaactagtggaggacatcggcggcagtgggaaatcgaaagctcgtcaatcaaaccgtccc
atctcccagagggtggtcaaggatgaaccgccagacgcatgggatggagatgaggaggag
gaagaggtgaagaaagtgaaagtggtagtgaaaccccaagtgaaaccccaagtgaaagtc
caagggaaggagaaggatctagagtacctgtttcaggaagtacagagggacgaatccctg
gatgagttcctaatgaaagatctgcagagcaagagaatggagcctaagtatcaggaaatg
ctgatattcagggaaagactgccatcctacagtaagagacatgagctggtggacctgatc
agctccagccgcgtagtggtggtgagcggggagaccggctgtggaaagaccacccaggtc
acccagttcatcctggacgactacatcacccgcggagtgggctcgctctgcagggtggtg
tgcacccagccgcgacgaatcagtgccatctccgtagcggaacgtgtttctgccgagcgg
gctgagacagtggggaacggaaactcgtgtggataccagatccgtctgcagagccggtta
ccacggaaacagggttcagtgctatattgtacaacgggcattattcttcaatggctccgc
tcagatcagacgctgtccaccatcagccatcttgttctggacgagatccacgagaggaac
ctgcagtctgacgtcctgctggtgatcgtcagggacctcctcgccgttcgcccggacctg
aaggtcatcctcatgagcgccacgctcaatgcagagaagttctccaaatactttggaaac
tgtccgatgatccacatcccggggctggcgttcccggttgaggagttcctcctggaggat
gtggtggagatgatcgggtaccgccctaagacccagaaccagcggccctcctggaagaag
ggcttcatgcagggccgcaactcccggcctgagaaggaggaaaaggaggcggagtacaag
gagagctggccatgctacgcccgcaccctgcaggacaggtactctgagagcaccatagag
gtattggagatgttggacaacgacgagaagatagacctggagctgatcctagccctcatc
cgccacattgttctccaggaggaggaaggagccatcttggtcttcctgccgggctgggac
aacatcagcggcctcaacgacctgctcatggcccagcagatgttcaaatccgatcggttt
gtgataatccccctccactccctgatgcccactgttaaccagactcaggtgtttaagagg
cctcctcctggggtgaggaagattgtgattgcgaccaacatagctgagaccagcatcact
atagacgacgtggtgtacgtgatcgatggagggaagattaaagagacgcacttcgacacc
cagaacaacatcagcaccatggcggctgagtgggtcagcctggccaacgccaagcagagg
aaaggacgcgctgggagggtgcggccgggaaagtgctaccacctgtacaacaaactgagg
gccagcctactggatgcctaccaactacctgagatcatgaggaccccactggaggagctg
tgcctgcaaatcaagatcttggacctgggggccatcgctgacttcctgagtagagccctg
gacccgcccaccgaagaggccgtcagcctggccatcaagcacctggtggacctgaatgct
ctggaccaatcagagaccctgacctcgctgggcgtgcacctggcccgcctgcctgtggaa
cctcacatcgggaagctgatcctgtttggcgctctgctgggctgcctggaccccgtcctc
accatcgctgcctcgctcagcttcaaagaccccttcttcatacccatgggcaaagagaag
atggccgacatgaaacggaggaccctgtcccggaactccaagagtgaccacctcaccatc
gtgaacgccgtccagggctgggaggaagccaagcggcgtggccaaaggtacgagcgggag
ttttgctgggaaaacttcttgtccgccaacacactacagatgctgcacaacatgaagggc
cagttcgccgagcacctgatgaaggtgggcttcgtcagcagcaaggaccccaaagacccc
aaggccaacgtcaactctgaaaacgagaagctgatgaaggcggtgatcgtggccggactc
taccccaaggtggcgatgatcaagccctcgcacagcaagaagtggaaagggtccaaggtc
tacacccaggctgacggcaaggtggtcatccaccccaagtcggtgaacgcagaggagaac
cagttcaactacacctggctcgtgtaccacctcaagatgaggaccaccagtatcttcctg
tacgactgtacggaggtgtccccgttctcgctgctcttcttcggcggcaacgtctccatc
cagaaggacgagggccaggagaccatcgccgtggaccagtggatcgtgttccggtccccg
gagcgcatcgcccacctggtcaagagtcttaagagggagctggacgtcctgctggaggag
aagatccgcaacccggccccggtggactggaacaaccgggagtccaaggactgcgccgtc
atcacggccatcatagacctcatcaccacccaggagaagggggctacggggggctaccag
ggagaggggtccggctaccaggctgacggctaccaggcggagcgctcgggctaccaggcg
gagcgctcgggctaccatgggggcggggccggctaccaagggggcggggccggctaccaa
gggggcggggccggctaccaagggggcggggccggctaccaagcggaacgatcgggctac
aaggccgacggctacaaccgccggttgggcaatgcacccagaggaccacgtctcgtcttc
aaagacgacgatgacgacgacgatgacgattag
DBGET
integrated database retrieval system
