Gadus morhua (Atlantic cod): 115561186
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Entry
115561186 CDS
T10832
Symbol
clpb
Name
(RefSeq) LOW QUALITY PROTEIN: caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gmh03110
]
115561186 (clpb)
Chaperones and folding catalysts [BR:
gmh03110
]
Heat shock proteins
HSP100
115561186 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA_5
AAA
Zeta_toxin
AAA_22
Sigma54_activat
AAA_24
AAA_3
ABC_tran
YchF-GTPase_C
AAA_16
nSTAND3
ATPase_2
RNA_helicase
AAA_14
NACHT
Motif
Other DBs
NCBI-GeneID:
115561186
NCBI-ProteinID:
XP_030236874
LinkDB
All DBs
Position
16:14946200..14956805
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AA seq
504 aa
AA seq
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SLSLSLSLSLSLSLSLSLSLSLSLSPVSLIPFCLSLPSSSNAHSYDEYQEKQREREGEXR
GRWFWDERERERADMRKEQVVCGGAVGCDAGGDELEHNTIAGRKVLILHYPSRKPYRTTK
CSSGHSLGELVLLEIKKTKNTQTMSPCANDSTCACCVPVVVVVVVVVVAVVDPAIRRKEN
GWYDEEHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGS
PPGYVGHEEGGQLTKQLKAYPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIEC
KDAIFIMTSNVASDEIGAHGVQLRQEAEKLSRRKLADNLDDVQKIDDIKISRQFKDSVIR
PILKAHFRRDEFLGRINEIVYFLPFCHSELLQLVSKELQFWAKKAKQRHGITLQWDRPVL
DLLAGGYNMHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLIVQSDGQEEPHPPSL
RLEVVGEDSSARTLDIRPPLSPEH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
tctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc
tctctctctctctctcccgtctcccttatacccttctgtctttctcttccctcttcatca
aacgcccactcctacgatgagtaccaggaaaaacaaagggaacgtgaaggagagtagaga
gggaggtggttctgggacgagagagagagagagagagcagatatgaggaaggaacaggta
gtgtgtggtggagcggtgggctgcgatgcaggtggagatgagttagagcacaataccata
gcaggccgtaaagtgctgatattacactacccttctcggaagccctaccgaacgaccaaa
tgttcctctggtcattcgctgggcgagttagtcttgctggaaataaaaaaaacaaaaaac
acacaaacaatgtcaccgtgtgcaaatgactcaacgtgtgcttgttgtgtccctgttgtt
gttgttgttgttgttgttgttgttgcggtcgtggacccagccatcaggaggaaggagaac
ggttggtacgacgaggagcatcccctggtcttcctcttcctcggctcctctggaatcgga
aagacggagttggccaaacaggtggctcgttacatgcacaaggatatcaaaaagggtttc
atccgcatggacatgtccgagttccaggagaaacacgaggtggccaagttcatcggctcc
ccccccggctacgtgggccacgaggagggcggtcagctcaccaagcagctgaaggcctac
cccaacgccgtggtcctgttcgacgaggtggacaaggcccaccccgacgtgctcaccatc
atgttacagctctttgacgagggccgtctgacggacggcaaggggaagaccatcgaatgt
aaggacgccatcttcatcatgacctccaacgtggcgagcgacgagatcggcgcgcacggc
gtgcagctgcggcaggaagcggagaagctcagccgcaggaagctggcggacaacctggat
gatgtccagaagatcgatgacatcaagatctccagacagtttaaggactctgtgatccgg
cccattctaaaagcccatttccgaagggacgagtttctggggaggatcaatgagatcgtc
tacttcctgcccttctgtcactccgagcttctgcagctggtcagcaaggaactacagttc
tgggccaaaaaggcgaagcagcggcacggcatcactctgcagtgggaccgtccggttctg
gacctgctggctgggggctacaacatgcactacggggcccgctccatcaaacacgaggtg
gagcggcgggtggttaaccaattagccgctgcatacgagcaggagctgctgccgaagggc
tgcaccctgcggctgatcgtccaatcagacggtcaggaggagccgcacccgcccagcctg
cgtctggaggtggtgggagaggacagctcagccaggaccctggacatccgacctccactc
agccccgagcactag
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