Gadus morhua (Atlantic cod): 115561201
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Entry
115561201 CDS
T10832
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115561201 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115561201 (copb2)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
115561201 (copb2)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115561201 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Prefoldin_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
115561201
NCBI-ProteinID:
XP_030236889
Ensembl:
ENSGMOG00000013927
LinkDB
All DBs
Position
16:26034676..26047600
Genome browser
AA seq
1133 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYSGSVVVWNHENQTLVKTFEVCDLPV
RVAKFVARKHWVVVGADDMQIRVFNYNTLARAHMFEAHADYIRCIAVHPTQPYILSSSDD
MTIKLWDWDRKWTCSQVFEGHTHYVMQVVFNPKDNNQFASGSLDRTIKVWQLGSKAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVHFHPD
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERSWCVTGQRGSNSVALGYDEGSIIIKMG
REEPAISMDASGKIMWARHSEVQQANLKAMGDAEVSDGERLSLAVKDMGSCEIYPQMLQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGPAHEFVWAHDSSEYAIRESNNLIRIFKNFKE
KKNFKPDFGAEGIYGGFLLGVRSVSGLAFFDWDSAELVHRIEIQPKHIVWSDSGELLCIA
TEESFFVLRYLAEKASAALESRQGLTEDGVEDAFEVLGEIQEVVKTGTWVGDCFIYTNSV
NRLNYYVGGEIVTVAHLDRMMYLLGYIPKDNRLYLGDKDLTVISYSLLVSVLEYQTAVMR
RDFSMADRVLPAIPKEQRIRVAHFLEKQGFRQQALAVSTDPEHRFELALQLGEMTIAHQL
ATEAESEQKWKQLAELATAKSQFGLAQECLHHAQDFGGLLLLATASGNSDMVGKLAKGAE
EKGLTNVAFLTFFLQGKLEKCLDLLVKTKRLPEAAFLARTYLPSHVPRVVKLWKESLAKV
NQKAADALADPTQYSNLFPGLQQALLAEQFLEETHVGARPAADYPLIMPNEDRAVLEESA
GYVPSGAAAAPEELMECVDDRPMAAAEMAEEVQGEEPLVDIVVPVAEPTPEVTEELVEIV
QSTTVEHALPSVETGMQEMSLVAEESHALEATTTALESETAVLVSHTSETIVTSETVVAT
ETIETVVETSEDSSEKLSMDFIATEVPATAAVARDTAPAKEEAPESDLLSFDSAPPSAEV
EELVDLGGSCDPELDVPVPEQILQESLESSVSKQPDAALDAVLADPLVKAEATTCPAAAP
AETELVKEEVSEEAEDQEMEMSDEGMEDLDLDNFDLDDMENEDLNLDDDFLNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgcttggacatcaagagaaagctgacagctcgttctgaccgcgtgaagagc
gtagacctgcatcccaccgagccatggatggtggccagtctgtacagtggtagcgtggtg
gtgtggaatcacgagaaccagaccctggtgaaaacctttgaggtgtgcgacctgcctgtc
agagtggccaagtttgttgccaggaaacactgggtggtcgtgggagcagatgacatgcag
atccgtgtgtttaactacaacacgctggccagggctcacatgttcgaggcccacgccgac
tacatccgctgcatcgctgtgcaccccacacagccctacatcctctccagcagtgacgac
atgacgatcaagctgtgggattgggacaggaagtggacgtgtagtcaggtgtttgaggga
cacacccactacgtcatgcaggtcgtcttcaaccccaaagacaacaaccagtttgccagc
ggctccctggacaggaccattaaggtgtggcagttagggtccaaagctcctaacttcacc
ctggagggccacgagaaaggggtcaactgtattgactactacagtggaggggacaagccc
tacctcatctcaggggccgacgaccggctggtcaagatctgggactatcagaacaagacg
tgcgtccaaaccttggagggccatgctcagaacgtgacctgcgtccacttccaccctgat
ctgccaatcatcctgacaggctcggaggacggcaccgtccgggtctggcactccagcacc
taccgactggagaacacgctgaactacggcatggagcggtcctggtgtgtgacgggccag
cggggctccaacagcgtggctctgggctacgatgaaggcagcatcatcatcaagatgggc
cgcgaggagccggccatctccatggacgccagcggcaagatcatgtgggcacggcactct
gaggtgcagcaggccaacctgaaggccatgggagatgcggaggtcagtgatggggaaagg
ctgtcgctggcagtcaaagacatgggcagctgcgagatctacccccagatgctccagcac
agccccaacgggaggttcgtagtggtgtgtggagacggagagtacatcatctacaccgcc
atggccctgaggaacaagagctttggccccgcccacgagtttgtctgggcccatgactct
tctgagtatgctataagagaaagcaacaatctcatcagaatcttcaaaaactttaaggag
aagaagaacttcaaaccagatttcggggctgagggtatctatggagggttcttgctgggg
gtgaggtccgtcagcggccttgccttctttgactgggacagcgctgaactcgtccatcgc
atcgagatccaacccaaacacatcgtgtggtccgacagcggggagctgctgtgcatcgcc
accgaagagtcgttcttcgtgctgcgctatctggccgagaaggcgtcggccgccctggag
tccaggcaggggctgaccgaggacggcgtggaggacgccttcgaggtgctgggggagatc
caggaggtggtgaagacggggacctgggtgggagactgcttcatctacaccaactctgtc
aaccggctcaactactacgtgggcggggagatcgtcacggtcgctcacctggacaggatg
atgtacctgctgggctacatccccaaggacaaccgtctgtatctgggggacaaggacctg
acggtgatcagctactcgctgctggtgtccgtgctggagtaccagacggctgtgatgagg
agggacttcagcatggctgaccgggtgctgcccgctatccccaaggagcagaggatcagg
gtggcccacttcctggagaaacagggcttcaggcagcaggccttggcggtatccactgat
ccggaacacaggttcgagctggccctgcagctgggagagatgacgatagctcaccaactg
gccacagaggcagagtcggagcagaagtggaaacagttggcggagctggcgactgccaag
tcccagtttggcttggcccaggagtgcctccaccacgcccaagacttcggggggctgctg
ctgctggccaccgcctctggaaactcggacatggttggcaagctggccaagggagcagag
gagaagggcctgaccaacgtggctttcctcacctttttcctgcaggggaaattggagaaa
tgcctggatctcctcgtcaaaaccaagcgcctgccagaggctgccttcctggccagaaca
tatttgcctagccacgtaccaagggttgtgaagctgtggaaggagagtctggccaaggtg
aaccagaaggcggcagacgcgctggccgaccccacccagtacagcaacctgttcccgggc
ctccagcaggccctgctggccgagcagttcctggaagagacccacgtcggagccaggcct
gcagccgactacccgctcatcatgcccaatgaggaccgcgctgttctggaggagtctgca
gggtatgtgccatcaggagcggctgctgcaccagaggaattaatggagtgcgtagatgat
cggcccatggcagcagctgagatggcggaggaggtacagggggaggagcctttggtcgac
attgttgtaccagtggcagagcccaccccagaagtaacagaagagcttgtcgagatagtt
cagtccacaacagtggaacatgccttgccctcagttgagacgggcatgcaggagatgtct
ctggtagctgaggaatcacatgctttagaagccacaacaacagcgttggagtctgagaca
gctgtgctagtttctcatacctcagaaaccatcgtcacctccgagacggtggtagcaacg
gaaaccattgaaaccgtagtcgagacctcagaggattcctctgagaaactctcaatggac
ttcatagcaaccgaagtcccggcaaccgcggccgtagcaagagacacagcgcctgcaaaa
gaggaagcacccgaatcagatctcctcagttttgattcagccccgccatcggctgaagtg
gaggaacttgtagatttaggcggatcctgcgatccggagttggatgtgcctgttccagaa
caaatcctccaggagtcgttggagtcttcagtatcaaagcagccagatgctgccctagat
gcagttcttgcagacccgctggtgaaagcagaagccacaacttgtccagcagcagccccc
gctgagacggagctcgtgaaggaggaggtttcagaagaagctgaggaccaggaaatggag
atgagtgacgagggcatggaggatctggatttggacaactttgacctggatgacatggag
aacgaagacctcaacttggatgacgacttcctgaatgaatag
DBGET
integrated database retrieval system
