Gadus morhua (Atlantic cod): 115561238
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Entry
115561238 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: stAR-related lipid transfer protein 13-like
KO
K20632
deleted in liver cancer protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115561238
Membrane trafficking [BR:
gmh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115561238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
Tra1_central
SAM_1
Mito_fiss_reg
CR_prot_dom_plant
DUF4937
Motif
Other DBs
NCBI-GeneID:
115561238
NCBI-ProteinID:
XP_030236972
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All DBs
Position
16:4387439..4424156
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AA seq
1138 aa
AA seq
DB search
MFRELPDTHDRECLGSMTPETQDIYLRIDHRHRRSGYRLGRIMARQQLLNKIAGEIEAKE
ACDWLRAAGFPQYAQLFEDSQFPIDISPVKRDHDFLEKDLVEPLCRRLITLNKCASMKLD
VNLPRKKSEDSDEEDVFAISDRWTFEWTSRRWSRLQDIDGFPRQPGGGASQRRGRGSPEG
GHQQRESVLTDLSEPEVSSLHSESSGGSPRPGGPAPRTRTAPTRTGSDSATMPDPTSVGL
SHIARDGTGYGSLPRRHARLGRTRAKDFLKRMETLRSPGGSXTGSRKTPSIGAPVLQDPP
PGLKSVRCVEIVDGEMPPPPPPPPPPPPPSGVRTATSQSTSEGSSCASSGSAASTPSLKE
RKATRADHKRSGMYLEDLDIFSAGQVKRVAEQNRRNEFCSHEDLVVHIPKDHKPGTFPKA
LVHREPVATSPPTNWHQAGVRLRLPGGGGGARPPGAKEPRPMTQCAPGAGRISVYDNVPG
SHLYASPGDLIDMEKEDLFPHLDDILLHVNGLQQIVDHWSQNVLPAAEAKSQGVVRGGGD
AGRIALDFEADAATEGQRTPSNGERDQVSLAELEGSPGPGETGTPGSGASLTRPRRLRWP
SFQIANRLSLSVASLQITNQSAGQLSLLQKFSLLRLTATMEKYSMSNRHGWTWSVPKFMK
RMKVPDYKDKNVFGVPLIVHVQRSGQPLPLSLQQALRYLRSQCLDQVGLFRKSGVKSRIQ
ALRQMTENSPDNVNYQDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVSKDQRL
QAVQAAIMLMSDENREVLQTLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFHLNLLKKDN
LSPRALQKKYATGRPDQKDLNENLAATQGLAHMITECNRLFEVPPHLLFMVTQSRNSXRE
EADLHAPTLSGLCRLLEEDDGVPAHPHGDRXLQSLLREARERSKYWVSCSSSDNTELCYK
KVGGAYAGXPVNPLRRWRGVRGGGGPPSVVLNRVLPCERHLWDVDLLQWKVTETLDRQTE
VFQYVLNRMPPHPSRDFVVIRSWRTDLAKGACSLVSASVEREDSPLLGGVRAVVLESGYL
LEPCGSGKSRLTHICRVDLKGRTPDWYNKVFGHICAAEVARIRNSFQPIIADGPETKI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttcagggagctgccggacacccacgaccgcgagtgtctgggtagcatgacccccgag
actcaggacatctacctcaggatagaccaccgtcaccggcgctccgggtaccgccttgga
cggattatggcccgccagcagctcctcaacaagatcgccggagaaatcgaggcgaaggaa
gcgtgtgattggctacgggcggcagggttccctcagtacgctcagctttttgaggactcg
cagttcccgatagacatcagtccagtgaagagagatcatgacttcctagagaaggacctg
gttgaacccctttgcaggcgtctgatcaccttgaacaagtgtgcctctatgaaacttgat
gttaatctcccaaggaaaaagagtgaagattctgacgaggaggacgtgttcgccatcagc
gaccgatggacctttgagtggaccagccgcaggtggtcccgccttcaggacatagacggg
tttcctcggcaaccagggggaggggcttcccaacggcgggggcggggctcccctgaaggc
ggccaccagcagcgagagagcgttctgaccgacctcagcgagcccgaggtgtcgtcgctg
cacagcgagagcagcggcggcagtccccgaccggggggcccagcaccgaggactcggacg
gctccaaccaggaccggctccgactcggccaccatgccggaccccacctccgtcggcctg
tcccacatcgccagggacggcaccggctacggctccctgcctcggaggcacgcccggctg
ggacgcacgcgcgccaaagacttcctgaagcgcatggagacactgcggtccccggggggc
tctnngaccggcagccgcaaaacgccgtcgataggcgcccccgttctgcaggaccccccg
ccggggctgaagagcgtccgatgcgtggagatcgtcgacggggagatgccgccgccgccg
ccgccgccgccgccgccgccgccgccttcgggggtccggacggcgacctcccagtcgacc
agcgagggcagcagctgcgcctccagcggcagcgcggccagcacccccagcctgaaggag
cgcaaggccacgcgggcggaccacaagcgcagcggcatgtacctggaggacctggacatc
ttctcggccggccaggtgaagagggtcgccgagcagaaccgccgcaacgagttctgctcc
cacgaggacctggtggtccacatccccaaggaccacaagcccgggaccttccccaaagcc
ctggtccatagagagcctgtcgccacctcgcccccgacgaactggcaccaggcgggcgtc
cgccttcgtctccccggcggcggcggcggcgcccgcccccctggcgccaaggagccgcgg
cccatgacgcagtgcgctcccggggcaggccgcatcagcgtgtacgacaacgtgcccggg
tcccatctgtacgccagccccggtgacctgatcgacatggagaaggaggacctcttcccc
cacctggacgacatcctgctccacgtcaacggcctgcagcagatcgtggaccactggtcc
cagaacgtgctccccgcggccgaggccaagagccagggcgtcgtccggggaggaggggac
gccgggcggatcgctctggacttcgaggcggacgcggcgacggagggccagcgcacgcct
agcaacggagagcgggaccaggtgtcgctggcggagctggaggggagcccgggtccggga
gagacggggactccggggtcgggggcgtcgctgaccagacccagacggttacgatggcca
agcttccagatagccaatcggctcagcctctcggtggcgtccctgcagatcaccaaccaa
tcagcaggccagctgagtctgctgcagaagttctctctgctccgcctgacggccaccatg
gagaaatactccatgtccaaccgccacggctggacctggtccgtgccaaagttcatgaag
cggatgaaggtaccggactacaaggacaagaacgtgtttggggtccccctcatcgtgcac
gtgcagcggtcgggccagccgctgcccctcagcctgcagcaggccctgcggtacctgagg
agccagtgtctcgaccaggtgggcttgtttcgtaaatcgggggtgaagtctcggatccag
gctctgcggcagatgaccgagaactccccggacaacgtcaactaccaggaccagtcggcc
tacgacgtggccgacatggtgaagcagttcttcagagacctcccggagccgctgctgacc
agcaagctgggagagaccttcctccatatctaccagtatgtctccaaggaccagaggctg
caggccgttcaggcggccatcatgctgatgtcggacgagaaccgcgaggtgctgcagacg
ctcctctgcttcctcagcgatgtcacttcctccgtggaggagaaccagatgacccccatg
aacatcgccgtgtgcctggccccctccctcttccacctcaacctcctgaagaaggacaac
ctctccccccgggccttgcagaagaagtacgccacgggccgaccggaccagaaggacctg
aacgagaacctggcggcgacacagggcctcgctcacatgatcacggagtgcaaccgtctg
ttcgaggtaccgccgcacttactcttcatggtcacccagtcccgcaactcgtgacgtgag
gaggcggacctccacgcgcccaccctcagcgggctctgccggctgctggaggaggacgac
ggggtccctgcccacccacatggagaccgcnggctgcagagcctgctccgggaggcccgc
gagaggtccaagtactgggtctcctgcagcagctcggacaacacggagctctgctacaag
aaggtaggaggggcttatgcgggctgaccggttaacccactgcgtcgctggcgcggtgtc
cgtggaggtggaggcccgccctcggtggtgctgaaccgcgtgctgccttgtgagcgccac
ctgtgggacgtggacctccttcagtggaaggtgacggagacgctggacagacagacggag
gtgttccagtacgtcctcaaccgcatgcccccccaccccagccgcgactttgtggtgatc
aggtcatggcggacggacctcgctaaaggagcgtgttcgctggtgtcggcgtcggtggag
cgagaggacagccccctgctggggggggtccgggcggtggtactggagtctggctacctg
ctggagccctgtggctccgggaagtcccgcctcacgcacatctgcagggtggacctcaaa
gggcggactcctgactggtacaacaaggtgtttggtcacatctgcgccgccgaagtcgca
cgcatccgcaactccttccagccaatcatcgccgacggacccgagaccaagatctga
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