Gadus morhua (Atlantic cod): 115561239
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Entry
115561239 CDS
T10832
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gmh
Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115561239
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115561239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
115561239
NCBI-ProteinID:
XP_030236973
Ensembl:
ENSGMOG00000010188
LinkDB
All DBs
Position
16:12588250..12617439
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AA seq
2129 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LSSDVLSVWRRHQTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPVQRLSEEHLGLVQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPTPKEVPEDKMDDGDWEDDSLAAVEVLVAGVRMVYPACLVLFPLSDVPAAAPQGAGH
PSGSLCGGQQGQSSHRDPAMSSVTLTPPTSPEEAQTDCQPAQRWLKLASATDGFSSSRGG
PHGGKVPSRLACQVVETVWQEYNINRADNKRKFSALTNGTCESKTDRTDLWDFLEPSHRA
HCNCTRHKNQKQRTSSTSTHPPASGPLPTPPPKHKLGEKLEKGDKQPKRPQTPFHHRSTA
AEEQYPEPQVQRFCPRGAPEEGYPSLHHVDTAPSSKAPTLHPHGPPSDLAGSPQPPPLSP
HPCVHAEGEPPAMKSSSTPIHQPFYPPSVEPCMLPQKAPHAEEPHLGAMARSFPPAYAES
LEPAVFVGSAVNPNEDSTHNPWKYFNLPRKRDSDFLPPPLPVDKIRDSGDSGAGLDAIVS
VTELMAGTSQTLKVSAELLKTYAQRRNNHLVSLSRDGDHGELDPYAFVDGDGDEDFSFGE
KKDKAGERDANKKQNGEDDGGSSADDGQGAAKPPASTSLIHENDLAVSYSDLDKIFNSDE
DDLAPGIRRAVAGGEDKFSKDGKPNTLDPLSCISSADLHQMFPTPPSLEQHIMSYSPMNH
GGKDYGGLEGAAGLSLLDGGLLASHFKAEVEEGFCSPRPAEIKDFSFVYKPEACPALVGC
TMYAPLKTLPSQCLMPIKLPEECLYTPSWTLGKMELIPPVQSMGLLTKDGNIPSVEPDYS
QSYTPQTHTPFMSNSAPPSNSGAGILPSPATPRFSVPTPRTPRTPRTPRGLKYDNSDLYS
PAASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFRDCNFDSCCVCVCNMNI
RGADVGVYLSDDGEAQYPCTCGFSAVSNRRFGQSAGLFLEDELDVVGRGSDSGRDTEKRY
EELRAASLHRGGSLKEKPPDELVLLLQDQCTNPFAPVAGVELLLPRPLGVLARPFVRVEE
RDCYNDCYMALEHGRQFMDNMSGGKVDEALVKSTCLHQWPKHKSADMSKLFSPDVLRVML
SLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGFEVD
FMVLSPFGLPYWEKLQLDPFGSQRDLGYVVICPDNDALLRGARTFFKDLTTIYEACQLGK
HRPICKSYAEGIVKVGVAEDRCATEQPLSDWFLKMTARDGNNDAFNKLKLFAQVCRYDLA
PYLSGQSLDASLLSQRSPAPPASSHTPSSSSSNTSGPPCSNTTSSSAGAAATPTAATATT
QPAQVNSTPAPSASGPQTVGGMASTKPSAYTPFGTSTTQGSASQNGPQLTPQGAAGPGEN
GPNANQPQVTVEPPNESTLDRDKVGKPTDGESHAISYPPAIVVYIVDPFSYEDADREVRS
SVYTLGLLRCYLEMLQFLPPNIRNALSVQIVPCQYLLQPVRSGQRHLYAQHLKSLAFSVF
TQCRRPLPGSTHFKALTGFGPGLAIDMALKSPERPECVRLYTPPFILAPIKDKQTELGET
FGEASQKYNVLFVGYCLSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSARRVG
LQKLWDWCLDLVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCKMC
GISAADTPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTH
ILVFPTSAMVQVNTNTTEPDLTFNPINADGSEGMGFFDLFDHDMVDPELINILPTSPTTS
PVHSPGSHYHQGGDGSKGHNTDRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSAC
PQAKNQCPLFLQASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTC
DPATQDRRSCLPVHFVVLNQLYNFIMNML
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccgaacggggccagtttggaggactgccactccaacctcttc
tgcttggccgacttgacggggattaaatggaggcgtttcgtgtggcagggtcccacctcg
tctcccatcctcttcccagtgactgaggaggaccccatcctctgcagcttcagtcgctgc
ctttcgtcggacgttctgagtgtgtggaggcgacaccagaccccgggacgcagggagcta
tggctcttctggtggggagacgaccccagctttgcagagctgatccacaacgagctctca
agcgaggaggacggggagtgggagagcggcctgtcgtacgagtgccgcacgctcctgttc
aaagccatccacaacctgctggagcgctgcctcatgaaccgcggcttcgtgcgcatcggg
aagtggtttgtgaagccctacgagaaggacgagaagcccatcaacaagagcgagcacctg
tcatgtgccttcaccttcttcgtgcacggcgacagcaacgtgtgcacgagcgtggagatc
gcccagcaccagcccgtgcagcggctcagcgaggagcaccttggcctggtccagcagagc
tccagcccgctgcaagtcatcctgagcccctacggcctcaacggaaccctcacgggccag
gcgttcaagatgtcggaccaccccacccagaagctcatcgaggagtggcggcagttctac
cccatcagccccacccccaaggaggtcccggaggacaagatggacgacggcgattgggag
gacgactcgctggcggctgtcgaggtcctcgttgccggcgtgaggatggtgtaccccgcc
tgcctcgtgctcttccccctgtcggacgtcccggccgcggccccccagggcgcgggccac
ccgtcggggagcctgtgtggggggcagcagggccagtcctcgcaccgggaccccgccatg
tcctccgtcaccctcacgccccccacgtctcccgaggaagctcagaccgactgccagccc
gcccagcggtggctgaagctggcctccgcgacggacggcttcagctccagcagagggggc
ccccacgggggcaaggtccccagcaggctggcctgccaggtggtggagacggtgtggcag
gagtacaacatcaaccgtgccgacaacaagaggaagttttccgccctgaccaacggaacc
tgcgagagcaaaacggatagaactgacctttgggattttttggagccctctcatcgggcc
cactgcaattgcacaaggcacaagaaccagaagcaacgaaccagcagcacctcaacgcac
cccccggcctcgggcccactccccaccccgccccccaagcacaagctgggggagaagctg
gagaagggcgacaagcagcccaagaggccccagacgcccttccaccaccgcagcaccgcc
gccgaggagcagtaccccgagccccaggtgcagcgcttctgcccgcgaggagcccccgag
gagggctaccccagcctgcaccacgtggacacggcgccctcctccaaggcgccgacgctg
cacccccacggcccgccctccgacctggccggctccccccagcccccgcccctcagcccc
cacccctgcgtgcacgcggagggcgagccgccggccatgaagagctcgtccacgcccatc
caccagcctttctacccgccctcggtggagccctgcatgctgccccagaaggccccccac
gccgaggagccccacctgggcgccatggcccggtccttccccccggcctacgccgagtcc
ctggagcccgccgtgttcgtgggctcggccgtcaaccccaacgaggactcgacccacaac
ccctggaagtacttcaacctgcccaggaagagggactcggacttcctgccgccgccgctg
cccgtggacaagatcagggactcgggggactcaggggccgggctggacgccatcgtgtcc
gtgaccgagctgatggcggggaccagtcagacgctgaaggtgtccgccgagctgctgaag
acgtacgcccagcggaggaacaaccacctggtgtcgctgagccgcgacggcgaccacggt
gagctggacccctacgccttcgtggacggagacggagacgaggacttcagcttcggcgag
aagaaggacaaggcgggagagagggacgccaacaagaagcaaaacggggaagacgacggt
ggatcctctgctgacgacggccagggggctgccaagccgcccgcctccaccagcctgatc
cacgagaacgacctggccgtgtcctatagcgacctggacaagatcttcaactcggacgag
gacgacctcgcgcccgggatcagacgagcagtggccggcggcgaagacaagttctccaag
gacgggaagcccaacactctggacccgctgtcgtgcataagctcggcggacctccaccag
atgttccccacgccgccctccctggagcagcacatcatgagctactcccccatgaaccac
gggggcaaggactacggcgggctggaaggcgcagccggcctctcgctgctggacgggggg
ctgcttgccagccacttcaaggccgaggtggaggagggcttctgcagcccccggcccgct
gagatcaaggacttctccttcgtgtacaagccggaggcgtgccccgcgctagtgggctgt
accatgtacgccccactgaagacactgcccagccagtgtctgatgcccatcaaactgcca
gaggagtgcctgtacacgccaagctggaccctgggcaagatggagctgataccaccggtc
cagtccatgggcctgctcaccaaagacggcaacatccccagcgtggagcccgactacagc
cagagctacacgccccagacccacacgcccttcatgtccaacagcgccccgcccagcaac
agcggcgccggcatcctcccctcgccggccacgccccgcttctccgtccccacgccgcgc
acgccccgcacgccgcgcaccccccgcggcctcaagtacgacaactcggacctgtactcg
ccggcggcctccacgccctccacctgccgcccgctgagctcggtggagcccgccacggtg
ccctccatcccggaggcgcacagcctctacgtcacgctcatcctgtccgagtcggtcatg
aacctgttccgcgactgcaacttcgacagctgctgcgtgtgcgtgtgcaacatgaacatc
cgcggcgccgacgtgggcgtgtacctgagcgacgacggcgaggcgcagtacccgtgcacg
tgcggcttcagcgccgtgtccaaccggcgcttcggccagtcggccgggctgttcctggag
gacgagctggacgtggtgggccggggctcggactcgggccgcgacacggagaagcggtac
gaggagctgcgcgccgcctccctccaccggggcggcagtctgaaggagaagcccccagat
gagctggtgctgctgctgcaggaccagtgcaccaaccccttcgcccccgtggcgggcgtg
gagctgctgctgccgcggcccctgggcgtgctggcgcgcccgtttgtgcgcgtggaggag
cgcgactgctacaacgactgctacatggcgctggagcacggccggcagttcatggacaac
atgtcgggagggaaggtggacgaggcgctggtgaagagcacctgtctccaccagtggccg
aaacataaatcagcggacatgagcaagctgttctcgccggacgtgctgcgggtgatgctg
tctctgcagcccgtgctgcaggacaccatccagaagaagaggagcgtccgctcctggggc
gtgcagggccccctcacctggcagcagttccacaagatggccggcaggggatcctacggc
acggacgagtcccccgagccgctgcccatccccaccttcctggtgggcttcgaggtggac
ttcatggtgctgtcgccgttcggcctgccttactgggagaagctgcagctggaccccttc
ggctcccagagggacctgggctacgtggtcatctgtccggacaacgacgcgctgctcaga
ggggcccgcaccttcttcaaggacctcaccaccatatacgaggcgtgtcagctggggaag
caccggcccatctgtaagagctacgccgagggcatcgtgaaggtgggcgtggcggaggac
cgctgtgccacggagcagccgctcagcgactggttcctcaagatgaccgccagggacggg
aacaacgacgccttcaacaagctcaagctattcgcccaagtgtgccgctatgacctagct
ccctacctgtcggggcagtcgctggacgcctcgctgctgtcccagcgcagcccggccccg
cccgcctcatcccacacgcccagcagctcctccagcaacacctcaggtcccccgtgctcc
aacactaccagctccagcgccggtgctgctgccacccccaccgccgccaccgccaccacc
cagcctgcccaggtcaacagcacccccgccccctccgcctcaggcccccagaccgtcggg
ggaatggcttccaccaagcctagcgcctacacccccttcgggacgtcgaccacgcaggga
agcgcctctcagaacgggccccagctgacgccccagggcgcggcgggccccggggagaac
ggccccaacgccaaccagcctcaggtcaccgtcgaaccccccaacgagagcacattggac
cgggacaaggtgggcaagcccacggacggcgagtcgcacgccatctcgtacccgcccgcc
atcgtggtgtacattgtggaccccttcagctacgaggacgcggaccgcgaggtccgctcc
agcgtctacaccctggggctgctgcgctgctacctggagatgctgcagttcctgcccccc
aacatcaggaacgcgctctccgtgcagatcgttccatgccagtacctgctgcagccggtg
cgcagcggccagcggcacctctacgcccagcacctcaagtccctggccttctcggtcttc
acccagtgtcgacgccccctgcccggctccacccacttcaaggccctgaccgggttcggc
cccgggctggccatcgacatggctctcaagagccctgagcggccggagtgcgtgcgtctg
tacacgccgcccttcatcctggcgcccatcaaggacaagcagacggagctgggcgagacg
ttcggcgaggcgtcgcagaagtacaacgtgctgttcgtgggctactgcctgtcccacgac
cagcgctggctgctggcctcctgcaccgaccagcacggggagctgctggagacctgcatc
atcagcatcgacgtgcccaacagggctcggaggaaaaagggctctgcccgccgggtgggc
ttgcagaagctgtgggactggtgtctggacctggtgcaggtgacatcgctgccctggagg
gtcgtgatcggacggctgggccgcatgggccacggagagctgagagactggagcattctg
ctaagcaggaggaacctgcagtcgctcagcaagcgcctgaaggagacctgcaagatgtgc
ggcatctcggccgccgacactcccagcatcctcagcgcctgtctggtcgccatggagccg
caggggtccttcgtcatcatgccagactcggtgtcgacgggctcggtgttcggccgcagc
accacgctcaacatgcagacgtcgcagctgagcacgccgcaggacacgtcgtgcacgcac
atcctggtgttccccacgtcggccatggtgcaggtgaacaccaacaccacggagccagac
ctcaccttcaaccccatcaacgcagatggctcggaagggatgggcttcttcgacctgttc
gaccacgacatggtggaccccgagctcatcaacatcctgcctacctcgcccaccacctcc
ccggtacactcccctggatcacactaccaccagggaggagacggcagcaagggccacaac
acggatcgcatggagtcccacgaggaggccctgaacatcctgcagcagcccatggccctg
ggctacttcatctccaccgccaaggctggccccctgcccgactggttctggtccgcctgc
ccacaagccaagaaccagtgcccgctcttcctccaggcgtccttgcatctgcacgtgtct
tcggtccagtcagacgagctcctccacagcaaacactcccacccgctggactccaaccac
acctccgacgtgctcagattcgtgctggagcagtacaacgccctctcctggctgacgtgc
gaccctgcaacgcaagaccggcgctcgtgcctgccagtccactttgtggtgctgaaccag
ctgtataactttatcatgaacatgctctga
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integrated database retrieval system
