Gadus morhua (Atlantic cod): 115561247
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Entry
115561247 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
gmh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115561247
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115561247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115561247
04090 CD molecules [BR:
gmh04090
]
115561247
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Nectin family
115561247
CD molecules [BR:
gmh04090
]
Proteins
115561247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C2-set_2
ig
I-set
Ig_2
TM_ErbB1
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
115561247
NCBI-ProteinID:
XP_030236992
LinkDB
All DBs
Position
16:complement(10753962..10780424)
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AA seq
544 aa
AA seq
DB search
MDSRSTDKHCSASANQVIVPEKVNAVLGKNITLGCKIEVGSNLTQSSWERHLRSGPITIA
VYNPEFGISISKEYAGRVSFLSASVHDATIILEGVGFADIGSYTCKVSTFPLGNTQASTT
VNVLVEPKVYVSGGPHPLLDGARESVVATCVAERGRPAAPWSWETSLDGRSEPATQDEAN
GTATVQAHYVWRPQSHAQGQSLTCVVRHPALTTDFRIPFALSVQFAPLVRILGDDKNWYV
GQKDVRLECGAKANPPARNFTWMRMDGPMPHGVVISNYSFAFTRPLDRNDSGVYRCEVLN
DIGLRSQDVHLWIQDPPSTTAAPTTAASLHRDAPGNSTEAQARAQLTSPTLASLPDSSLG
TIVGGAVGGVLFLALLLVLAAVCCMRKRRTFRGDYYTKQYLGPSDMQKEAQLDVLQPHEL
QEVYGDKGSNGGSSGVGGGKGSSQDLKPKPGGDVIYPEYPNERKEHDDWGVGHHRAGDGH
SDEPYYPEHYKNSHNVHPCGPPVHSSTVNGSPYVPEDCYDNNGTDSDYVSHMDGSVISRR
EWYV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaggtcaacggacaaacattgcagcgcgagcgctaaccaagtgatcgtaccc
gagaaagtgaacgcggtgctggggaagaacatcaccctgggatgcaagatagaggtgggc
tccaacctgacccagagctcctgggagcgccatctgcgctcgggccccatcacgatagcg
gtgtacaaccccgagttcgggatctcaatctccaaggagtacgccgggcgcgtctccttc
ctgtcggcctcggtgcacgatgccaccatcatcctggagggggtcggcttcgccgacatc
ggctcctacacctgcaaagtgtcgacgttcccgctgggcaacacgcaggcgtccaccacc
gttaatgtattagtggagcccaaggtgtacgtgtcgggcgggccccacccgctgctggac
ggcgcacgcgagtcggtggtggccacgtgcgtggcggagcggggccgcccggccgcaccg
tggtcctgggagacgtctctggacggccgctcggagccggccacgcaggacgaggccaac
ggcaccgccaccgtccaggcccactacgtgtggcgcccgcagagccacgcccagggccag
agcctcacctgcgtggtgcgccaccccgccctcaccaccgacttccgcatccccttcgcg
ctcagcgtgcagtttgcaccattggtgcggatactgggagatgataagaactggtatgtg
ggccagaaggacgtccgcctcgaatgtggtgccaaggccaacccccccgcccgcaacttc
acctggatgaggatggatggcccgatgccccacggcgtggtgatatccaactacagcttt
gccttcaccagacctttagaccgcaacgactctggagtgtaccgatgcgaggtgttgaac
gacattggcctgcgaagtcaagacgtccacctttggatacaagaccctccctcgaccacc
gccgcccccaccaccgccgcctccctccaccgcgacgcgcccggtaacagcacggaagcc
caagcccgggcccagctcacctcgcccaccctggcctcgctgccagacagcagcctgggc
accatcgtgggcggggcggtgggtggcgtgctgttcctggcgctgctgctggtcctggcc
gccgtgtgctgcatgcgcaagcgccgcaccttccgcggcgactactacaccaagcagtac
ctggggccctcggacatgcagaaggaggcgcagctggacgtgctgcagccccacgagctg
caggaggtgtacggcgacaagggcagcaacggcggcagcagcggcgtgggcggcgggaag
ggcagcagccaggacctgaagcccaagcccgggggcgacgtcatctaccccgagtacccc
aacgagcgcaaggagcacgacgactggggggtgggccaccaccgggcgggcgacggccac
agcgacgagccgtactacccggagcactacaagaacagccacaacgtgcacccctgtggc
ccgccggtgcacagctccacggtgaacggctccccctacgtgccggaggactgctacgac
aacaacggcacggacagcgactacgtgtcgcacatggacggctcggtgatctcgcgccgc
gagtggtacgtctga
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