KEGG   Gadus morhua (Atlantic cod): 115561326
Entry
115561326         CDS       T10832                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03020  RNA polymerase
gmh03420  Nucleotide excision repair
gmh04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115561326 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115561326 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115561326 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmh03021]
    115561326 (polr2f)
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115561326 (polr2f)
Transcription machinery [BR:gmh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115561326 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     115561326 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     115561326 (polr2f)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115561326 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 115561326
NCBI-ProteinID: XP_030237153
Ensembl: ENSGMOG00000009967
UniProt: A0A8C4ZEJ7
LinkDB
Position
2:23367073..23370166
AA seq 127 aa
MSDNEDNFDDGDFDEGEEDEGLDDLENPEDEDRENVAVLPAGSGSGANAKRITTVYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDNSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaagacaacttcgatgatggggatttcgacgaaggagaggaagatgaa
ggactggatgatctggagaacccagaagacgaggaccgggagaacgtggcggtcctgccg
gctgggagcggcagcggggcgaacgccaagaggatcaccaccgtctacatgaccaagtac
gagcgagccagggtgctggggacccgggccctgcagatagcgatgtgcgctccggtcatg
gtggagctggagggagagacggaccccctgcagatcgccatgaaggagctcaagtgcagg
aagatccccatcatcatccgccgctacctccctgacaacagctacgaggactggggctgc
gacgagctcatcatcacagactag

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