Gadus morhua (Atlantic cod): 115561359
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Entry
115561359 CDS
T10832
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115561359 (trip12)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
HECT type E3
115561359 (trip12)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115561359
NCBI-ProteinID:
XP_030237241
Ensembl:
ENSGMOG00000007345
LinkDB
All DBs
Position
16:complement(14427562..14455067)
Genome browser
AA seq
2064 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPLDHTVAGRLQSEQVKLKANSPPDSRRPNSKASKAT
TSSASGQSRGHSSRRSGLSLSVASFVLPDDPEAAGTSQQERPGHQSKSESTRGLKRNSAP
DHVSTYVPTPAKKSKTLPPRRDNTLETKKSSAKSKKRPLAPEPPAPSGRGQGKKSGAAGA
SPTLKRKKADPLPGLSSTTGSLPNSIEGRTAKPSKLASKSAASAKAGCSAVTDSSSSAST
SSSSSSAGTNSAAPQGARVKQGKDQNKARRSRSASSPSPRRSTRDKEQAKAAGSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEAPQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALIALLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFNFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQQVASPDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKDDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADADLLKDVLRNHSVSSHIAS
MLSSLDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACT
SGTTSLCTTTISTASTTAATNVTPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDEDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKETACKFVERYFNSENVDCSNPALNVLQRLCAATEQ
LNMQKVDGGVECLLEISGIVSESDVSSFEIQHSGLVKQLLLYLTSNTDRDVVGRDLVGRD
VRLKRFLNVFYGCPLPGMETAGRLDPSENGPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GSGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYG
RIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSL
QAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGTKDAVGGKRGRAQTAPTKTSP
RNAKKQDELWHDGVCPSVANPLETYLISEPPENITFEDPSLEVNLLLRVLHAISRYWYYL
YENAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQ
MLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQD
LGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEVTLANPKGSQESTK
YMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPYYKWMLR
HETSISSHDLVNIDPAVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQGLESLNMNGCSVE
DLGLDFTLPGYPNIELKKGGKDIPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESV
FPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSKDA
EQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDY
SSIEIMREKLLIAAREGQQSFHLS
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgtcgttcacagaggaacact
gctgcggcccagccactagaccacacagtcgcgggaaggttgcagtcagagcaggttaaa
cttaaagcaaattcccctcctgatagtagaagaccaaattctaaggcttccaaagccacg
accagctcagcctctggccagtccagagggcacagctcaagaagaagcggcctttctcta
tccgtggcttcctttgtgctaccagacgacccagaggctgcagggacatcccaacaagag
cgaccaggccaccaatcaaagagtgaaagcacccgtgggctaaagcgaaattcggcacca
gaccacgtcagcacctacgtacccacccctgccaaaaaatcaaaaactctgccaccacgc
agagacaatacacttgagaccaagaagagctcagcaaagtccaagaagagaccgcttgca
ccggagccacctgcgccctcaggtcgagggcagggcaagaaaagcggggccgccggggcc
tctccgactctgaaacggaagaaagcggaccctctccccggtttgagtagcaccactggg
tccctccccaacagtattgagggcagaactgcaaaaccctccaagctggcgtcaaaatcg
gcagcctcagccaaagctgggtgtagcgccgtgacggactcctcctcttctgcctctaca
tcttcctcctcctcctccgccggcaccaatagcgccgccccacagggtgcccgggtcaaa
cagggcaaagaccagaacaaggcccgccgatctcgctcagcctctagcccctcccctcgc
cgcagcactcgggacaaggagcaagctaaggctgctggatcttccaaatttgagtgggca
gcccgctttaaccccaaagtcaatctgccaaagcccaaactgtccctgcccgggtcctct
aaaactgaaacctccaaacctgggccgtctggactacaggctaaacttgcaagtttgagg
aagtccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggccgactccgacaacaaccag
gatggggccaactcatccgccgctcgcactgatgaggcgccgcaaggggcctccgcttct
agttcagttgctggagctgttggcatgactacctctggagagagtgagtcagacgactct
gaaatggggagattacaggcccttctggaggccagaggtctccccccacatctctttgga
cccctcgggcctcgcatgtcgcagctgttccacaggaccataggcagtggagccagctcc
aaagctcagcagctgctccagggcctgcaggctacaggcgacgagtcccagcagctccag
gctgccatagagatgtgccagctgttggtaatgggcaatgaggaaacactgggtggcttc
ccagtcaagagtgtggtgccagccttgattgcattgttacagatggaacataattttgat
attatgaatcatgcatcccgtgctctcacctatatgatggaagcacttcctcgttcttct
gctgtggtggtcgatgccattcctgtcttcctggaaaagcttcaggtgatacagttcatt
gacgtagcagagcaggcgctgacagccttggagatgttgtcaaggcgacacagcaaagcc
attctacaggctggtgggctcgccgactgcctgctgtacttggagttcttcagcatcaat
gcccagaggaatgccctggccatcgcagccaactgctgccagagtatcacacccgatgaa
ttcaattttgttgctgattctttaccgttgctgactcagagactcactcaccaggacaag
aaatccgttgaaagcacttgtctatgtttcgcccgactggtcgacaactttcaacacgag
gagaacctgctgcagcaagtggcctctccggatctgctgaccaatattcagcagctgctg
gtggtgacccctccggtgctgagctcggggatgttcatcatggtggtgcgcatgttctcc
ctcatgtgctccaactgcccctgcctggccgtgcagctcatgaagcagaatatagccgag
acccttcgcttcctcctgtgtggcgcgtccaacggtagctgccaggagcaaattgacctg
gttccccgcagccctcaagagctctatgaactcacctccctcatatgtgagctgatgccc
tgcctgccaagagagggcatctttgctgtggacgtcatgctgaagaagggcagtgctcag
gccaccgaaggggccatctggcaatggagagatgaccgggggctctggcacccgtacaac
cgcatcgacagccgcatcatcgagacggcacaccagaacggagaggatgagatcagcttg
tctaccctgggacgtgtctacaccattgactttaactctatgcagcagatcaatgaagac
acaggcacggcacgaggaatccagaggaaaccgaatcctcttgctaatcccaatacaggg
agccaccaagaggtgcggcgggaggacgcccgcgcacagctgatgaaggatgaccccgag
ctggccaagtgcttcatcaagaccctgttcggggtcctgtacgaggtgtacagctcctcc
gccggccccgccgtcagacacaagtgccttagagccattctcaggatcatcttctttgcg
gacgcagacctgctgaaagacgttctgagaaaccactctgtgtccagtcacattgcctcc
atgctatccagtctggatctgaagattgtagtcggttccctgcagatggctgagatcctc
atgcagaagttgcccgacgtcttcagtgtctattttagaagagaaggtgtgatgcaccag
gtgaagaacctggcagagtccgagagcttcctggtcaccagtcctccaaaggcttgcact
agtggcaccaccagtctttgcaccacgaccatcagcaccgcgtccaccacggccgccacc
aacgttacccccgacctgggctcgcccagcttccagcacagcatggatgactctcttgac
ctcagtccacaggggcggttaagtgatgtgctcaagaggaagcggctacccaaacgagga
cctagaagacccaagtattctcccccaagagatgaagacaaagtagacaatcaggcaaag
agccctaccactactcagtcccccaagtcctccttcttggccagtctcaaccccaaaacg
tggggtaagcttggaacccagaccaacagcgccaactctgagccctcacgcacagccggg
gtcagtggcttggcaagggcacctcccaaagactcaatctcaaacaacagggacaagatc
aaggcctggattaaagaaacagcctgcaagtttgtggagcgctacttcaactctgagaac
gtggactgcagcaaccccgctctgaacgttctccagaggctctgcgctgccaccgagcag
ctcaatatgcagaaggtggacggaggcgtggagtgtctgcttgagatctcgggcatcgtg
tcggagtcggacgtgtcgtcattcgagatccagcacagcgggctggtgaagcagctgctc
ctctacctgacctcaaacacggaccgtgacgtggtgggccgcgacttggttggccgcgac
gtgcggctcaagaggttcctcaacgtcttctacggctgtccgcttcccggaatggagacg
gctggtcgtctggatccatcagagaacgggcctctcttggctctggtgcacaagatgaac
aactgcctgagccagatggagcagttccctgtcaaggtgcacgacttccccagtggcaac
ggcagcggcagcaggggctcgcaagcacttaagttcttcaacactcaccagctgaagtgt
caacttcagagacacccagattgcactaatgtgaaacaatggaaggggggcccagtgaag
atcgaccccctggccctggtgcaggctatcgagagatacctcgtggtccgaggttacggg
aggatcagagaggaggacgaagacagcgacgacgacggttcagacgacgaaatagacgaa
tcattggcggctcagttcctgaactccggcagcgtgcgccacagactgcagttctacatc
ggcgaccacctgctgccctacaacatgacggtttaccaggccgtgaggcagttcagcctg
caggccgaggaggagagggagtccaccgacgacgaggccaacccgctggggcgcgccggc
atttggaccaagacgcacaccatatggtataaaccggtcagggaggacgaggacggcacc
aaggacgccgtgggggggaagaggggcagagcacagaccgcccccaccaagacctcccct
cgcaacgccaagaagcaggacgagctgtggcacgacggagtgtgtcccagcgtcgccaac
cccctggagacgtacctcatttcagagcccccagagaacatcacctttgaggacccctct
ctggaggtcaacctgctccttagggtgctgcacgccatcagcagatactggtactacctg
tatgagaatgctgtgtgcaaggagatcatccccaccagcgagttcatcaacagcaagctg
acggccaaggccaacagacagctgcaggacccgctggtcatcatgacgggcaacattccc
acctggctcatagagctcggcaagacctgccccttcttcttcccatttgacactcgacag
atgctgttctacgtcacagcgtttgaccgagacagagccatgcagcgcctccttgacact
aaccctgagatcaaccagtcagactctcaggacagcagagtggcaccccgacttgacagg
aaaaagaggacaataaaccgcgaggagctgctcaagcaggcagagtctgtgatgcaggac
ctcggcagctcccgggccatgttggagatacagtatgagaatgaggtgggtacaggtctc
ggccccacactggagttctacgctctggtgtcccaggaactgcagagggctgacttaggc
ctgtggaggggagatgaggtcacactggcgaaccctaaaggaagccaagagtccaccaag
tacatgttcagctcccgggggctgtttgcagttccttttggcagaaccaccaaaccagcg
cacatcgccaaaatcaagatgaagttccgtttcttggggaagctgatggccaaagctatt
atggacttcagactgctcgacctgcccctgggcctgccctactacaagtggatgctccgg
cacgagacgtccatcagctcccacgacctggtcaacatcgacccggccgtggccaagtcc
atccagcacctggaggacatcatccgccagaagaagaggctggagcaggaccgctcacag
acgagggagaccctgcagcagggcctggagagcctgaacatgaacggctgctccgtggag
gacctcggcctggacttcaccctgcccggctaccccaacatcgagctcaaaaaggggggc
aaggacatccctgtcaccatctacaacctggaggagtacctcaggttggtggtgtactgg
accctgaacgagggcgtgtccaggcagtttgagtccttccgggaaggctttgagtcggtc
ttccccttgcaccacctgcagtatttctacccagaggagctggaccagctgctgtgtggc
agcaagtctgagacgtgggacgtgaagacgctgatggagtgctgccgtcccgaccacgga
tacacacatgacagccgtgcggtgcgtttcctgttcgaggtgctgagcagcaaagacgcc
gagcagcaaagactcttcctgcagtttgtcaccggaagtcccagactgcctgtgggaggc
ttccggagtctgaacccgccgctgaccatcgtgaggaagaccttcgagtccaccgagaac
cccgacgacttcctcccttccgtcatgacctgcgtcaactacctgaagctgccagactac
tccagcattgagataatgcgagagaaactgttgattgcagcccgcgagggccagcagtca
ttccacctttcctga
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integrated database retrieval system
