Gadus morhua (Atlantic cod): 115561492
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Entry
115561492 CDS
T10832
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115561492
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115561492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115561492
Spliceosome [BR:
gmh03041
]
Common components
Common spliceosomal components
SR proteins
115561492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115561492
NCBI-ProteinID:
XP_030237467
Ensembl:
ENSGMOG00000030266
LinkDB
All DBs
Position
16:14215415..14219088
Genome browser
AA seq
273 aa
AA seq
DB search
MSGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSGRGGGGGGGGFGGGDGGRGGGGGGGG
GGGGGGGIGAPRGRYGPPSRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGT
GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRGSRSRSP
TSRSATRSRSNSRTRGRGSPRYSPRHSRSRSRS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggagcgttgtgcgaggacccgcggggaacaacgactgccggatctacgtgggg
aacctcccgcctgacattcgcactaaggacgtggaggacgtgttctacaaatacggagcg
ataagggacatcgacctgaagaaccggagaggaggacccccgttcgcctttattgaattc
gaagaccccagggacgcagacgacgcagtttacggacgcgacggctatgattacgatggt
tacagactccgcgttgagttcccccggagcggaagggggtcggggagaggtgggggcggc
ggcggaggaggattcggcggtggtgatggaggaagaggaggaggaggaggaggaggaggt
ggtggcggcggcggtggcggcatcggtgctccaaggggcagatacgggcctccatccagg
cgctccgaatacagagtcattgtctccggtctaccccagagcggcagctggcaggacctg
aaggaccacatgcgcgaggcgggagacgtgtgctacgccgacgtcttcagggacggcacc
ggcgtggtcgagtttgtgcgcaaggaagacatgacgtacgccgtgagaaaactggacaac
accaaattccgctcgcacgagggagagaccgcgtacattcgcgtgaaagtcgacggcccc
cggagcccgagctacggccgctcccggtcccggagccgcggcagccgcagcaggagcccc
accagccgcagcgccacccgcagccgcagcaactcccgaacccgtggccgaggatcgccg
cgctactccccccggcacagccgctcccgctcccgctcctaa
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