Gadus morhua (Atlantic cod): 115561621
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Entry
115561621 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115561621
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Gene cluster
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NCBI-GeneID:
115561621
NCBI-ProteinID:
XP_030237624
Ensembl:
ENSGMOG00000027618
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Position
16:34658223..34664183
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AA seq
928 aa
AA seq
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MFSVHSHVGSATVECQHKIKSHLKKKFKCVSEGIPKAGNQTGLNDFYTEIFITERGSGEV
NKEHEVRLIETASRKPAKEETPIKCEDIFKPLPGRDQPIRTVMTTGVAGIGKTILTQKFT
LDWAEGKANHDIHFTFLLTFRELNLLKEKEYSLVELLHHFFIETKEAGICRYERFKVLFI
MDGLDECRLPLNFQNNQTWTDVKEPSSVDVLLTNLIRGDLLPSARIWITTRPAAANRIPA
ECVDKVTEVRGFTDPQKEEYFRKRFREETLANTIISHVKKSRSLHIMCHIPVFCWITATV
LEDILKKSQIEEMPKTVTQMYSYFLWVQSIQGDRKYYGRAETDPYWGPESRKIIVSLGKL
AFNQLEKGNLIFYKADLAECHIDIKEASVYSGVFTKIFKEECGMYQDKVFCFVHLSLQEF
LAALYVFLSFINDGFNLLSEEPPTSVEDKLLLLYKSAVDKALQSKNGQLDLFLRFLLGLS
LETNQFVLRGLLGRTGTSSLTNTKTVSYIKEKIDGDLSPERSINLFHCLNELNDRSLVKE
IEQYLTSGSLSRKSLSPAQLSALAFILLTSEEELDMFDLKKYSDSEEGLLRLLPVVKASK
TSLLNGCHLSERCCEALASVLSSNSSSLRELDLSTNDLQDSGVKLLSAGLGSPLCTLETL
RLNSCHLSARCCEALASVLSSNSCSLRELDLSTNDLQDSGVKLLSAGLGSPHCTLETLRL
SGCLVTQGGCASLASALSSNPSHLRELDLSYNHPGDSGAALLSAGLEDPRWRLDTLSVEH
GGVLRLKPALKKYACELTLDPNTFHRRLSLSEDNRKVTLVGEDQLYPDHPERFDYWEQVL
GREALTGRCYWEVEWEGPVVIGVTYRGITRRGRGDDSWLGGNNKSWSLYCRDGGFSVRYD
GRETDLPFPPAGSTRVGVYLDRPAGSLS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgttcattctcatgtaggatctgctactgttgagtgccaacataaaatcaag
tctcatttgaaaaagaagttcaagtgtgtgtctgagggaatccctaaagcaggaaatcaa
acgggtctgaatgacttctacacagagatcttcatcacagagagaggcagtggagaggtc
aacaaggaacatgaggtcagactgattgaaacagcttccaggaaaccagccaaggaagaa
acaccaatcaaatgtgaagacatctttaaacccttacctggacgagatcaaccaatcaga
acagtaatgacaactggagtggccggcattggtaaaaccatcttaacacaaaagttcact
ctggactgggctgaaggcaaagccaaccatgacatacacttcacatttctcttaactttc
agagagctgaatttactgaaagagaaagagtatagcttggtggaacttcttcatcacttc
tttattgagaccaaagaagcaggaatctgcagatatgaacggttcaaagttctcttcatc
atggatggtcttgatgagtgtcgacttcctctgaacttccagaacaaccagacctggact
gatgtcaaagagccgtcctcggtggacgtgctgctgacaaacctcatcaggggcgacctg
cttccctccgctcgcatctggataaccacacgccctgcggcagccaatcggatccctgct
gagtgtgttgataaggtgacagaggtgagggggttcaccgacccacagaaggaggagtac
ttcaggaaaagattcagagaggagacgctggccaacacaatcatctcccacgtcaagaaa
tcacgaagcctccacatcatgtgtcacatcccagtcttctgttggatcactgctacagtt
ctggaggacatcttaaaaaaatcccagatagaagagatgcccaagaccgtgactcagatg
tacagctacttcctttgggttcagtccatacagggggacaggaagtattatgggagagct
gaaacggatccatactggggtccagagagcaggaagattattgtttctttgggaaaactg
gcttttaaccagctggagaaaggcaacctgatcttctacaaggcagacctggcagagtgt
cacatcgatatcaaagaagcctcagtgtactcaggagtgttcaccaagatctttaaagag
gaatgtgggatgtaccaggacaaggtgttctgctttgtccatctgagcctccaggagttt
cttgctgccctttatgtctttctgtccttcatcaacgatggtttcaatctgctctcagaa
gaaccacccacctctgtggaagataaactcctcctcctctacaagagtgctgtggacaag
gccttacagagtaagaacggacaactggacttgttcctccgcttcctcctgggcctctct
ctggagaccaatcagtttgtcctacgaggtctgctgggacggacaggaactagctcactg
accaataccaaaacagtgtcttacatcaaggagaagatagatggagatctctctccagag
agaagcatcaacctgttccactgtctgaatgagctgaacgaccgttctctagtgaaggag
atcgaacagtacctgacatcaggaagtctctccagaaaatctctctctcctgctcaactg
tcagctctggccttcatcctactgacatcagaagaggagctggacatgtttgacctgaag
aaatactctgattcagaggagggtcttctgaggctgctgccagtggtcaaagcctctaaa
acatctctgctcaatggctgtcatctgtcagagagatgctgtgaagctctggcctcagtt
ctcagctccaactcctctagtctgagagagctggacctgagtaccaacgatctgcaggat
tcaggagtgaaactgctctctgctggactggggagtccactatgtacactggaaactctc
aggctgaatagctgtcatctgtcggcgagatgctgtgaagctctggcctcagttctcagc
tccaactcctgtagtctgagagagctggacctgagtaccaatgatctgcaggattcagga
gtgaagctgctctctgctggactggggagtccacactgtacactggaaactctcaggttg
tctggctgcctggtcacacagggaggctgtgcttctctggcctcagctctgagctcaaac
ccctcccatctgagagagctggacctgagctacaatcacccaggagactctggagctgcg
ctgctctctgctggactggaggatccacgctggagactggacactctcagtgtggaacac
ggtggagtgttgaggctgaaaccagctctaaagaagtatgcctgtgaactcacactggac
cccaacacgttccacagacgactctctctgtctgaggacaacagaaaggtgacgctggtt
ggtgaggaccagttgtatccggatcacccagagagatttgactactgggagcaggtgttg
ggtagagaggctctgactggccgctgttactgggaggtagagtgggaaggacctgttgtt
ataggagtgacatacagaggaatcacaaggagaggacggggtgatgacagctggcttgga
gggaacaacaagtcctggagtctttattgtcgtgatggtggtttctctgtccggtacgac
ggtagagagacagacctccctttcccccccgctggctccaccagagtaggagtgtatctg
gaccggcctgctggctctctgtcc
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