Gadus morhua (Atlantic cod): 115561657
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Entry
115561657 CDS
T10832
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03440
Homologous recombination
gmh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115561657 (brca2)
03460 Fanconi anemia pathway
115561657 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115561657 (brca2)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115561657 (brca2)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115561657 (brca2)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115561657 (brca2)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115561657 (brca2)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
115561657 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
115561657 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
115561657
NCBI-ProteinID:
XP_030237680
LinkDB
All DBs
Position
16:4307908..4330650
Genome browser
AA seq
2833 aa
AA seq
DB search
MDASSRNMFDTLKDHIWDNLRQLDPDWFNALAVKASNEENNRTGLNQPRPAHGGEGFKTP
FGKNALDSQPFSTPKIFRHSRSLLSPDPQHDGSFIEQGKEPLPWAAMGTGLQGTSAERSC
SSTSVTKLFRNRNHPNHFELLDTPQRTLKMMESLGAEVNPDVSWTSSLNTPPNVPSTLIL
SKNEVMSSLESTSDDKNIVFVRKLFPSLADASGVNVQSPSKNPKPNTPQTVVGGRDASQE
GTSSDSMHSSLDQGDEQWRQTLPDAILDKELRDAVAGVLDGAENVLSVFFTNSSSTLRRV
KSKERIKRRQKGRTRHARRVSVERLAETVGITEGDEKLEGTDLCPPAPSTPPAQRETSGG
AGADSQWSPISLTEITEAGLDSSVDNLGKQQEPESGHFTGKTECMLDPSKVTLQTLNAAD
SLFSKKKRQFVYNVHSPLPRGKEEHKPTQKAQQSKLISDQEPCVHRQEPTADVPPSVQGP
LGGCGPVPSAATGTSQDLDMSQLCRALDQDFTQMTEVVKTQQDLFSPSTCLLLVKERNKK
IFTDGEASRRETVCPRADKGPELTGYRSNSYVVPDSGILSCATDHQKLCRTSSPVPSIVP
KQSFHGANSTGTKKSLVPFTPLSAEKERSLYDEMEEDPPELNQSVQSHSISGIEPLIEEV
IGPQGDLGGDVYTERNTEGQATMKEQYGLGFLPSTSGSSGFKTASNKGIPISSVNLQKAR
DIFKEVEEVSFPNVPLTRNDESTRNDMNKSILQNDVLVSAIPAVPASAQAPAPAFVPAVL
GEKSVCNQHRLTASQKAHVTELCSLLEETHTQYDFTPFKPAELNVTHQEVDLSPKATDAE
LDPDSLVGIVFDDSFSFDAEKHLDENVQIPLGCSNHMVSTLDNESVIPLKKNETSTPINV
HITKRKATLKAVDVSNGHENNTTSYTKLPNHQEKYPLMCNLGFQTAGGKSFSVSKKCLSK
AKALFSDLEDSYLPFTDTADGSRHVSVNSGTASTHQQIPNRNSHNIASGVGTSNNLHLDS
PVSNTVNSGEKVSITGTPFCPSISSDKPTAEKPGCENSQFHNAKVSELKGGFSTASGRGI
TMSARAIKAASSFFKDLDAMVNQDDAPPQHRKCNTVMVNEKESDCSLKKETFTEPEQRYR
EIASACVVPSASLATKSDDDNQTYNGGFKTPMATDVVSIPRRAPLKEQSGSVSSASATLV
VGSYRHGGFSTASGKKVSVTGEALAKAQTLLNECDLVEEVKLNVDASTARSLPTPSPKED
CFKPGAIRRSTLTAKCPCPSSSENVGPSVVSESGSARGFSTASGNMVSVSDKALTKASSL
LNENLTDKEKQQAALTGNHQGQSPNPILLKPRGGFQTASGKGVAISAAALQKAKAMMSDC
DAPPTADNQGQSLNPIPGGFHTASGKGVAVSAAALQKAKAMMSDCDAPPTADHQGQSPNP
IPGGFHTASGKGVAVSAAALQKAKAMMSDCDAPPTADHQGQSPNPIPGGFHTASGKGVAV
SAAALQKAKAMMSDCDATMEAPAHSNGPTKAPRPGSGFHAATGKPVQVSSEALQKARSVF
DDLSYDAETVAPSTSTEEKFRECPRNLEGMKLSFTTAKGAIVQDSEDNLLKAKNRLNVEE
ESVCSMSGANSHLEDNNELEMLDVNTTLLNTDNRRTEKQTTPRERNAFTSTCEDLEGDAQ
SADTSASVEGRILCAPMVSEKMTVQSYGPVNIAGETANATGKRSIDDADLTDQPPLKRRL
LEEFDRAVNGDRARTLLPAKCSPQGFLNDRRVFKYKVSLEPHITGPHRDGKSFVVYANPK
PPPGPAPIPAATPGPLASGSRVPVFVPPFLKRRRTDTPQSNPDPQGTTRARTPAVFIPPF
KKPLQPPTPLPLPLPPSSPTPAETSPYVRPATITTKGTAMVTVTHGEGRGSGCHDSEADG
VPGESAATACDPATRNLDVEQDPVDPDGLRDLRLARDLQDMRLRKKKRQTVRPLPGSLFL
AKASGGARIPLRAAVCGLPPGRHSPQQLYQHGVHQPVWTVTAENAESFRLSFRRFFRWGS
LGEQGGVQLADGGWLVPRDDWTLGKEEFYRALCDSPGVDVKLLSQEWAYNHYRWVVWKLA
SMERSFPLTMASLWLNPEQILLQLKYRYDVEVDHSRRPALRKITERDDAAAKTLVLCVCG
VVRTGPDPGAPNGPADQQTPKAESHAPPPGVVWLTDGWYAIKAQLDAPLTAMLRRGRLEP
GGKLVVYGAELVGSQDGCSPLEAPEGLMLKIGANSCRRARWDAKLGFQRDPRPFLLRLSS
LFSTGGAVGCVDLLILRSYPVLWMEKKQDGVFVFRSGRAEEREARRFDDHNNKTMEALYA
KIQADIQREDKGTDPPARRRTLRQKDVEKLSDGEELYEAFENDPAYLEACLNDQQLEVLQ
SYRRSVLEKRQAGLQERCRRALEQAQESQGGCPRRDVTPVWKLCVVDARAPPGDSVYMLN
VWRPPADLQAQLKEGARYRVYNLSVTAGKKRNPGASVQLTATSKTHFQEVQVGQDWLSDH
FQARQAVHFQELQRPEVQSACGEVDLVGYVVTTADTHGTSPVVYLVDGDLNLVKVRCFSS
LLQWGLEELVKPATLLALSNLQLSARRATTLPVLYASDLTAFSSNPREAHLQSALAQLRT
QTRAQDGFLQRAQETLSCWNQGEDAAAGSSPWSNRPRTPAIPTAPGRPSPAVCVTPHQPT
RLFSATSSSTPQTDNPPPPPTSDPKTLRRRRALDYLSRMPSPPPLGPLGSLASPACVKKT
FNPPRRSTTPAAVATTRHVVAVETTRHVVAVETTTPAPRTTGRTMKEQEEEWENDEGLAQ
IDTQVLHGGGEAS
NT seq
8502 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtcttccagaaacatgttcgataccttgaaagatcacatatgggacaacctc
aggcagctcgaccctgactggttcaacgcgctcgcggtgaaagcgtctaacgaagagaat
aaccgaaccggactgaaccaaccgagacccgctcacgggggggagggcttcaaaacacca
ttcggcaagaatgcattagacagccaacctttctccacccccaagatattcagacacagc
aggagtttactatcccctgacccgcaacatgatggatcgtttattgaacaagggaaggag
cctcttccatgggctgctatggggactggactgcaggggacgtccgcagaacgttcctgc
tccagtacctccgtgaccaaactgttccggaacaggaaccatccaaaccactttgaacta
ctggacacaccccagcgaaccctgaaaatgatggagagtcttggggccgaggtgaaccct
gacgtgtcctggaccagctccctcaacaccccacctaacgtcccctcgaccctcattctg
tctaaaaacgaggtgatgtcctctcttgaaagcacgtccgacgacaaaaatatcgttttt
gtccggaagctcttcccgtctctagcggacgcatctggagtcaacgtacaatcgccctcc
aagaaccccaaacccaacaccccgcaaactgtggtcggtggtcgagatgccagccaggag
ggaacgtcgtcggactccatgcattcctccctggaccagggcgacgaacagtggaggcag
accctccccgacgccatcctggacaaagagctccgcgacgcggtggccggcgtcctggac
ggcgcggagaacgtcctctccgtgttcttcaccaacagcagctcgactctcaggcgggtc
aaaagcaaggagcggatcaaacggaggcagaaggggcggactcggcacgccaggcgggtc
tccgtggaaaggcttgcagagactgtcgggataaccgagggggatgagaagctggagggg
accgatctctgccctccggccccttctactccccccgctcagagagagactagcggtggg
gctggtgcagacagtcagtggtctccgatcagtctgacagagatcacagaggctggtttg
gatagttcagttgacaatcttggaaaacaacaagaaccggaatccggacattttacagga
aaaactgaatgcatgttggatccttctaaagtaacgttgcaaacgttgaatgcagcagac
tctctttttagcaagaaaaaaagacagtttgtttataacgttcacagtcctctacctaga
gggaaggaagaacacaagccaactcagaaagcacaacaatctaagctcatctctgatcaa
gaaccgtgtgtgcatcggcaggagccaacagctgatgttccacccagcgtccagggccct
ttggggggatgtggtccagttccttctgcagcgacggggaccagtcaggatctggacatg
tcccagctctgcagagccttagaccaggatttcactcaaatgacagaggttgtaaaaaca
caacaagatctcttctccccctccacctgtctgttactggtcaaggaaaggaacaagaaa
atatttaccgatggggaggcaagccggagggagactgtctgtccccgcgccgataaaggg
ccagagctgacgggctatcggagcaactcctacgtagtgcctgacagtggcatcctgtct
tgtgctaccgatcaccaaaaactgtgccgaacgtcttcccctgttccctccatagtccct
aagcaatcgttccatggtgcaaactctacagggaccaaaaagagtcttgttccttttacc
cctctaagcgcagagaaggaaagaagtctttatgacgaaatggaggaggatccacccgag
ttaaatcagtccgtccaatcccactcgatatctggcattgaaccattgattgaagaggtc
atcgggcctcaaggagaccttggtggagatgtttatactgaacgcaatactgaaggtcag
gccactatgaaggagcaatacgggttaggatttcttccttcgacaagcgggtcatccgga
ttcaaaacggcttcaaataaggggattccgatttcttcagtgaatctgcagaaagccagg
gatatctttaaagaggttgaggaggtaagctttccaaatgttccgctcaccagaaatgac
gaatccacaaggaacgacatgaacaagtccatcctacaaaatgatgtcttagtttcagcc
attccagccgtcccagcctcggcccaagcccccgccccagccttcgtcccggcagtttta
ggtgagaaaagtgtttgtaatcaacaccgtttgactgcgtcacagaaagcccatgtcaca
gagctgtgtagccttttagaggaaacacacacccagtatgatttcactccgttcaaacct
gcagagctgaacgtaactcatcaagaagtggatctctcccccaaagcgacagatgcagaa
ttagacccagactctcttgtcggtatagtttttgatgacagttttagcttcgatgctgaa
aagcatctcgatgaaaacgtccaaattcctctaggatgcagcaaccacatggtttcaact
ttggacaatgaatcagttattcccctgaaaaagaatgaaacgtccacccctatcaatgta
cacatcaccaaacgaaaagccactctcaaagccgttgatgtgtcaaatgggcatgaaaat
aataccactagttacactaaattacccaatcatcaggagaaatatcccttgatgtgtaac
ctaggctttcaaactgctggtggtaagtccttcagtgtttcaaagaagtgtttgagcaaa
gccaaagctttgttttcagacctagaggacagttatttaccattcacagacactgctgat
ggctcccgtcatgtatcggtaaacagtggcactgcttccactcaccaacagatacctaac
cgtaactcgcacaatattgcttctggtgtgggaactagcaacaatctccatcttgatagc
ccggtttctaacaccgtaaacagcggtgaaaaggtctccatcactgggacacccttttgt
ccaagcatctcaagtgataaacctacagctgaaaaacccggatgtgagaatagtcaattt
cataatgctaaagttagtgaactgaagggaggtttctcgacggccagtgggagaggcatt
accatgtcagcacgagctatcaaagcagcaagcagtttcttcaaagatttggatgctatg
gtaaaccaggatgatgctccacctcaacatcggaagtgtaacacagtaatggtgaacgaa
aaggaaagcgactgcagccttaaaaaggaaactttcacagaacctgagcagaggtaccgt
gaaatagcaagcgcttgtgtcgtgccttctgcatccttggcaacaaagagcgatgatgac
aaccaaacgtataacggtggtttcaagacaccaatggcgacggacgttgtttctatcccc
aggagagcacctctgaaggagcagtcggggtctgtatcctcagcctctgccacgctggtt
gttggatcttaccgtcacggtggtttctccacagcaagtgggaagaaagtttctgtgacg
ggtgaagcactggcaaaagcccaaactcttctgaatgaatgtgatttggtagaagaagta
aaactgaacgttgatgcttcaacagcacgctctcttcccactccatctccaaaagaggat
tgttttaagccgggtgctataagaaggtccactttgaccgcaaagtgtccttgcccttcc
tcttcagagaatgttggccccagtgtggttagtgagtcaggtagtgctaggggtttctct
acggccagtgggaacatggtgtcagtgtctgacaaggccctgaccaaagccagttctctg
ctgaacgagaatttaaccgacaaagaaaaacaacaagctgctctaacaggaaaccatcag
ggccaatctccgaatccgattctactgaaaccaaggggtggatttcagaccgccagtggt
aaaggagtggccatttcagctgccgctctgcaaaaggcgaaagcaatgatgagcgattgt
gatgcccctccaacagcagacaatcagggccaatctctgaatcctatcccaggtggattc
cataccgccagtggtaaaggagtggccgtttcagctgccgcactccaaaaggcgaaagca
atgatgagcgattgcgatgcccctccaacagcagaccatcagggccaatctccgaatccc
atcccaggtggattccataccgccagtggtaaaggagtggccgtttcagctgccgcactc
caaaaggcgaaagcaatgatgagcgattgcgatgcccctccaacagcagaccatcagggc
caatctccgaatcctatcccaggtggattccataccgccagtggtaaaggagtggccgtt
tcagctgccgcactccaaaaggcgaaagcaatgatgagcgattgcgatgccactatggag
gcccccgcccattccaatgggccgaccaaagctccaagacctggcagtggttttcacgca
gccaccggtaaacccgtacaggtgtcgtccgaggccctgcagaaggctagatcagtcttt
gacgacttaagttacgacgccgagaccgttgccccctcgacgtcaacggaggaaaaattc
agagaatgtccaaggaatcttgaaggaatgaagttgagcttcaccactgcaaagggcgca
atagtccaggactctgaggacaatcttttaaaggcgaagaaccgtttgaatgtagaagaa
gagagtgtttgttctatgtctggtgctaactctcacttggaagataataatgagctagag
atgctagatgttaacacaacattactgaacacggataatcggagaactgagaagcaaacg
actcccagagaaagaaatgctttcacttctacgtgtgaagatctggaaggtgatgctcag
agtgctgatacgagtgcttcagtggaaggtcggatactgtgtgctccaatggtgtcagag
aagatgacggtccaatcatatggtccggtcaatatagcgggagaaacggccaacgcaaca
gggaagagatccatagatgatgcagatttgactgaccaacctccgctaaagaggcggtta
ttggaagagtttgatcgtgctgtgaatggagatagggcaaggaccctgctgcctgctaaa
tgttctccccagggttttcttaacgacaggagggttttcaagtacaaggtctccctggag
ccacacatcaccgggccacacagggatgggaagagctttgtggtctacgccaatccgaag
ccccccccaggcccggctcccattcccgccgccacccccggccccctggcctcgggctcc
agagttccggtcttcgtccccccgttcctaaagaggaggagaaccgacaccccccagtcc
aacccggacccccaaggcacgaccagggccaggacccctgctgtgttcatccctcccttc
aagaaacccctacaaccccccacacctcttcctctccctctccctccttcttcaccgaca
ccggctgaaaccagcccgtacgtccgaccggcgaccataacgaccaaaggcactgcgatg
gtaacggtgacccacggagaaggaagagggagcggttgtcatgacagcgaggcagatggc
gtcccaggggagtctgctgccacggcctgtgacccggcaactagaaacctggacgtggag
caggacccggtggaccctgatggcctccgggacctccggctcgcgcgggacctccaggac
atgaggctcaggaagaagaagcgccagaccgtgcgtccgctccctgggagcctgttcctg
gccaaggcctcgggcggggccaggatcccgctccgggccgccgtctgcgggctccctccc
ggccgccactccccccagcagctgtaccaacatggagtccaccagccggtgtggacggtg
acggcggagaacgctgagtccttccggctctccttccggaggttcttcaggtggggatcg
ctcggtgagcaggggggggtccagctggcggacggaggctggctggtcccccgcgatgac
tggaccctgggcaaggaggagttctacagggctctgtgtgacagcccgggggtggatgtg
aagctgctgagccaggagtgggcgtacaaccactaccgctgggtggtctggaagctagcc
tccatggagagatccttccctttgaccatggcaagcctctggctgaacccagaacagatt
ctcctccagctcaaataccgctacgacgtggaggtggaccacagccggcgcccggccttg
aggaagatcacggagcgggacgacgcggccgccaagaccctggtcctctgtgtctgtggg
gtggtccgcacgggaccggaccccggcgctcccaacgggcctgccgaccagcagaccccc
aaggccgagtcccacgcccctcccccgggcgtggtgtggctgacggacggctggtacgcc
atcaaagcccagctggacgccccgctgacggcgatgctgcggcgcgggcgcctggagccg
ggcgggaagctggtggtgtatggagccgagctggtgggctcccaggatggctgctccccc
ctcgaggcccccgagggcctcatgttgaagatcggggccaacagctgcagacgggcccgt
tgggacgctaagctgggcttccagcgcgacccccgccccttcctgctgcgcctgtcctct
ctgttcagcaccgggggggccgtcggctgcgtagacctcctcatactcaggagctacccc
gtcctgtggatggagaagaagcaagatggcgtctttgtgttccgtagcgggcgagcagaa
gagcgcgaggctcggaggttcgacgaccacaacaataaaaccatggaggccctctacgcc
aagatccaggcggacatccagagagaggacaaaggtaccgacccgcccgctcggaggagg
actctgaggcagaaggacgtggagaagttgagcgatggagaggagctttacgaggcgttc
gagaacgaccctgcttacctggaggcgtgtttgaatgatcagcagctggaggtccttcag
agctaccggcgctctgtcctggagaagcggcaggccgggctgcaggagcgctgcagacgt
gccctggagcaagcccaggagagccagggaggctgtccccgacgagacgtcacccctgtc
tggaagctgtgtgtcgtagatgcccgggcgccacccggcgactctgtctacatgttgaac
gtgtggaggcctccagctgacctgcaggctcagctgaaggagggcgctcggtaccgcgtc
tacaacctctccgtcaccgctggcaaaaagcgtaaccctggggcgtctgtccagctgacc
gccaccagcaagacacacttccaggaagtacaggtgggccaggactggctgtcggatcat
ttccaggccagacaggcggtccacttccaggagctccagcgcccagaggtgcagagcgcc
tgtggggaggtggacctggtgggatacgtcgtcaccaccgcagacacgcacggtacctcc
ccggtggtgtacctggtggacggggacctgaacctggtgaaggtccgctgcttctcctcc
ctcctccagtggggcctggaggagctggtgaagccagccacgctgctggctctgagcaac
ctgcagctcagcgcccggcgtgccacgacacttccggtcctgtacgccagcgacctcacc
gccttctcctccaacccccgcgaagcccacctgcaaagcgccctcgcacagctgagaacg
cagacccgggctcaggacgggttcctccagcgagctcaggagacgctcagctgctggaac
cagggagaggacgcagccgcgggctcttcgccctggtcgaaccggcccagaaccccggcc
attccaacagccccgggtcgaccaagccctgcagtctgcgtgactccccatcagccaacc
aggctcttctccgccacctcgtcctccactccccagaccgacaaccctcctcctcccccg
actagcgaccctaagaccctgcgtcgcaggagagctctggactatctgtctcgcatgcca
tcacccccgccgctcggccccctgggaagtctggcgtcacccgcctgcgtcaaaaagacc
ttcaaccccccacgcaggtccacaacgccggccgccgttgcaacgacgagacacgtggtc
gccgtggaaacgacgagacacgtggtcgccgtggaaacgacgaccccagctccacggacc
acgggtcggaccatgaaggagcaggaggaggagtgggagaacgatgaaggactagcgcag
attgacacgcaggtcctgcatggtggaggtgaggcctcctga
DBGET
integrated database retrieval system
