Gadus morhua (Atlantic cod): 115561694
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Entry
115561694 CDS
T10832
Symbol
arap1
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115561694 (arap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115561694 (arap1)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115561694 (arap1)
Endosome - Golgi transport
Arf GTPase associated proteins
115561694 (arap1)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115561694 (arap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_3
PH_6
PH_9
Motif
Other DBs
NCBI-GeneID:
115561694
NCBI-ProteinID:
XP_030237741
Ensembl:
ENSGMOG00000017266
UniProt:
A0A8C5CC94
LinkDB
All DBs
Position
16:complement(14884344..14926119)
Genome browser
AA seq
1687 aa
AA seq
DB search
MSQSEMCVSVWDWLCALRLEQYCDAFQDFGLLTLGQCQSLSLEQLESLGVTLPGHRRRIL
ASLHKSQSPTHPPPHQQPDTQGSPRPRPNQAVAAEEVAAQQQGRGAALCPKPPQRERPVP
VPPDRERPVPKERREVLPVPRERPRPTPRERAARSSERSGSEEGRGDSGEEGRTPRLQRD
RPRARTVNEADGGPEEGRPKPVPRERTKHSASCPEDTGSDPALPPIPPRSTPNRPPQRFT
LPTPSPPVPVPAGSSPTPSSRTPPPPDVPSRSQGPSLHTTPTLQTPPPITQTAVQPPGSP
APPPSPLPRPKTLALLPPLAPRRGAGGEGRRTSPASPATTPPLPRSCLSSSTASSASSSS
SSTSTSPSSHYSLPPELKAEIVAPPLPPKASPAPAASQMSWPRERVQLSRFRRGHSPVHP
RVASSDDPAPAALPRARTPKTPEDPSPRLPLDPQQPEVLTSAQPALPALPARDLWRPPSI
TASKQDSSDDSDYTEPFIPSSLLVNSPDKDMLLPVPRQKKRISSLCSDDELLDDDESNAN
HRDSWLDYEPVSTQGSLYLPSCGPLGLPPKEDSAHQSAVIKMGWLDKNPPQGALYYQRRW
VKLDVDYLRYFDNEKEVYSKRMIATAAITKVMCVGELKFEVVTNNRTFLFRAENEVERND
WVADLLDCTRGRRRISTISTGSSVTTECYKGYLELRGLRSKLFTVVASDKVFLYKNIEDY
HIGMGITSIDMNVGNVKDTDRRSFDLTTPYRIFCFTVESEQLKEQWVEAMRTAIGEALSN
SEVAERIWAEPSNGCCADCGAAGPDWASINLCVVVCKRCAGEHRGLGPSISKIRSLKMDR
KVWTEDLIQLFLLLGNERVNAFWAANVPPSEALAPSSCSRDRRSFIGNKYRQGKYRKYHP
LYGNQRELDNALCINVQCSDVLETLSLVFCGADVNGPTGIADCPSTFSLATAHGQPLQAE
FLSHNLNTELPRSEVGGAMETVHYAPSPSVSHNGFLYKTGSMARAIAEKKGRDEFSRRWC
TLNDGCFSYYESDKNSSPNGTLKAAEIVCLAVSPPEKHGYDHTFELYSDSDRLYLFGTDD
PESHREWVKSLAKTFIPANADPLLRLGFERIGRLKYKDGLNLQTPKVGWFALVGSTLYAY
LDNSQGEEIHLRKLLELSIQQDNEVLVLVERGRTLYMEGERKLDFAGWCSAIQSAAGSGG
DTLSQQQLTDTDIPVIVHSCIGYITQCGLTSEGIYRKSGVNSRVAALCDDFRRDARSICL
REGVHQVDDVSNALKRFFRDVEAGLFTPEATAAWLSTVALPEHSQKIAQYQLLLSRLPCV
NKATLTALVKHLYCVQRFSELNQMNLHNLAIVFGPTLFQTDGKDYTAGLVIEGLIEHYTR
IFEVDEQQLKKQLDEITAIIKVRESCNTKVPTNGSGDFICTVYLEEKTETAEQHVKIPGS
MTAAELTCEILDRRNIPIKEKDYWSCWEISVKEEIERPLHYQERVLAMLHSLGTDSYLLI
KKHLAMEIMKVYLATKVDVAKNGLMKFREERSILGLGGFNERYFILNANTLRMYKEVRSN
RPERDWSVKSLRIYLGIKKKVRPPSSWGLTMVYQSEKQEKPERQQWYLCCSSEAEMTEWF
ATFLSIQFDGDVWPEHGVQHRRSTRPPPPDIRHGNVSLIPLRGSENEMRNSVAAFSQDQL
ALFRDIR
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctgagatgtgtgtgtctgtgtgggactggctgtgtgccctgcgtctggag
cagtactgcgacgccttccaagacttcgggctgctgacgctggggcaatgccagagcctc
tctctggaacagctggagagtctgggagtcacgctgccgggacaccggcgacgcatcttg
gccagcctgcacaagtcccagtcccctacccaccctcctccccatcagcagccagacaca
cagggctccccgaggccccgtcccaaccaagccgtcgcggcggaggaggtggcggcgcaa
cagcaggggaggggagcagccctgtgccccaagccgccccagagggagagacccgtgccc
gtcccgcccgatagagagaggcccgtcccaaaggagaggagggaagtcctgcctgtcccc
agagagaggccgaggcctaccccccgggagagggccgcacgctcctcggagaggtccggc
tcggaggaagggaggggggactccggggaggaggggaggacgccccggctgcaacgggat
aggccgagagcccggacagtcaacgaggcagatggagggccggaagaggggaggccaaag
cccgtgcccagggagaggactaagcatagcgcctcttgccctgaagataccggcagcgac
cctgccttgccccccatccccccaaggagcacccccaaccgcccacctcagcgcttcacc
ctccccacccccagcccccccgtcccggtccccgctggctcatctccaacccccagcagc
aggacccctccgccccccgacgttcccagcaggagccagggccccagccttcacaccacc
cccaccctccagacccctccccccatcacacagacggccgtccagcctcctggttccccc
gcccccccgccctccccccttccacgccccaagacattggctctgctccccccactcgct
cctcggaggggggccggcggcgaagggagaaggacttcgcccgcctctcccgccaccacc
ccgcctttaccccgctcctgcttgtcgtcatccactgcctcctctgcatcctcctcctcc
tcctccacctccacctccccttcctcccactactccctaccaccagagttgaaggccgag
attgttgccccacccctgcctcctaaagccagcccggctccggcagcatcccagatgtcc
tggccccgggagagggtgcagctctccaggtttcggcgtggccacagccccgtccatcca
agagtggcctcgtccgatgacccagcgcccgccgccttgccccgcgccaggacgcccaag
acacccgaagacccgtccccgcgcctgccgctggatcctcagcagcctgaggtgttgacg
agcgcacagccagccctgccagccctgccggccagagacctctggcggcccccttccatc
actgcatcaaaacaggacagttctgatgactctgattatacagagccatttatcccaagt
agccttttagttaactcaccagacaaggatatgttactgcccgtgccaaggcagaaaaag
cgtatcagttcattgtgcagcgatgacgagctactggatgacgacgagtcaaatgctaac
catcgtgactcatggttggactacgagcctgtgtcaacacaaggcagtctttatctgcca
tcctgcggcccattgggcctgcctccaaaagaagactccgcccaccagagcgcggtcatt
aaaatgggctggctggacaagaaccccccgcagggggccctctattaccagagacgatgg
gtcaaacttgatgtggactacttgagatactttgacaatgagaaggaggtgtactccaag
aggatgattgcaacagctgccatcacaaaagtcatgtgtgtgggagagctcaagtttgag
gtggtcaccaacaaccgcaccttcctgttccgggcagagaatgaagttgagaggaacgac
tgggttgctgatctgctggactgcaccagggggcgccgtcgcattagcactatcagcaca
ggctcatctgtgaccactgagtgttataagggctacctggaactccgaggcttacgctcc
aaactcttcactgtcgtggcctcagataaagtcttcctctacaagaacattgaggactac
cacataggaatgggcataacgtccatagacatgaacgtggggaacgttaaggacaccgac
cggcgtagcttcgacctcaccacgccctaccgcatattctgcttcacggtggagtcagag
cagctcaaggagcagtgggtcgaggccatgcgcaccgccataggggaggccctgtccaat
agcgaggtggctgagcggatctgggcggagcctagcaacggatgctgtgccgactgcggc
gcggcgggtcccgactgggcgtccatcaacctgtgtgtggtggtctgcaaacgctgcgca
ggagagcacagaggactgggtcccagcatctctaaaattcgtagtctgaaaatggaccgg
aaagtgtggacagaggatctcatacagctgtttttgttgctaggcaacgagcgggtcaac
gcgttctgggccgccaacgtgccgcccagcgaggccctggcgccctctagctgcagcagg
gataggcggagcttcatcggcaacaagtaccgccagggaaagtacaggaagtaccacccg
ctgtacggcaatcagagggaactggacaacgcgctgtgtatcaatgtgcagtgcagtgac
gtcctggagacactgagcctggtgttctgcggtgccgatgtgaacggtccgaccggcatt
gccgactgcccctcgacgttttccctggccacggctcacggccagcccctgcaggccgag
ttcctcagccacaacctcaacacagagctgccccgctccgaggtgggcggggccatggag
acggtgcactatgcgccctcgccgtccgtctcccacaacggcttcctgtacaagacgggc
tccatggcacgtgccatcgcagagaagaagggcagagatgagttcagtcgtcgctggtgc
acactgaacgacggatgcttcagttactacgagagcgacaagaactccagccccaacggg
acgctgaaggcagccgagatagtgtgtctggcggtcagcccccctgagaaacacgggtac
gaccatacctttgagctatactctgactcagaccgcctctatttgttcggcaccgatgac
ccggagagtcatagggaatgggtcaagtccctcgccaagaccttcatcccagccaatgca
gaccctctgctgaggttgggcttcgagcggattggtcgactcaaatacaaagatgggttg
aacttgcagacgcccaaggttgggtggttcgctctggtgggctccacactttacgcctac
ctagacaacagccagggagaggagatccatctgcgcaaactcctcgagctctcaatccaa
caagacaatgaggtgctggttctggtggagaggggcaggactctgtacatggagggggag
aggaagctggactttgccggctggtgctctgccatccagagcgctgcgggcagcggcggg
gacaccctgagtcaacagcagctcacggacacggacatacccgtcatagtgcacagctgc
atcggatacatcacccagtgcgggctgacctcggagggaatctaccgcaagagcggggtg
aactcgcgcgtggcggcgttgtgtgacgatttccgccgtgacgcgcgcagcatctgcctc
cgggagggcgtgcaccaggtggacgacgtcagcaacgccctcaagcgcttcttcagggac
gtggaggcgggcctgttcacccccgaggccaccgccgcctggctgagcaccgtggccctg
ccggaacacagccagaagatagcccaataccagctgctgctgagcagactgccctgtgtc
aacaaggccactctgacagccctggtgaaacacctctactgtgtgcagcggttctcggag
ctgaaccagatgaacctccacaacctggccatagtgtttggtcccacgctgttccagacc
gacggcaaggactacacagctggcctggtcatcgagggcctcatagaacactacacgcgc
atctttgaggtggatgagcagcagttgaagaagcaactggatgagatcacagccatcatc
aaagtgcgagagagctgtaatacaaaagtccctacaaatggctctggggattttatctgc
accgtgtacttggaggaaaagactgaaacagctgaacagcatgtaaagatccctggctcc
atgacagcggcagagctgacctgtgagatcctggaccggcggaatattcccatcaaggag
aaggactactggagctgctgggagattagtgtgaaggaggagattgaacgaccgctgcac
tatcaggaacgggtgttggccatgctgcactcactaggaacggactcctacctgctcatc
aagaagcatctcgccatggagataatgaaggtctacctggccactaaagtggacgtggcc
aaaaacggattgatgaagtttagagaagagcgcagcatcctgggcctgggaggcttcaat
gaacgctacttcatcctcaacgccaacaccctgaggatgtacaaagaagtcaggagtaac
cggcctgaacgggattggtcggtgaagagcttgaggatctacctgggcattaagaagaaa
gtccgtcctccttctagttggggcttgacgatggtgtatcaaagtgagaaacaggagaag
cccgaaagacagcagtggtatctgtgctgtagcagtgaggctgagatgaccgagtggttt
gcaactttcctcagtatccagttcgacggggacgtgtggcccgagcacggtgtgcagcac
cgccgcagcacccgcccgccgccgcctgacattcgccatggtaacgtgtccctgataccg
ctgcggggcagtgagaatgaaatgcggaacagtgtggcagctttcagccaggaccagctt
gctctttttagggacattcgataa
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integrated database retrieval system
