KEGG   Glutamicibacter mishrai: NMP99_02130
Entry
NMP99_02130       CDS       T08378                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gmi  Glutamicibacter mishrai
Brite
KEGG Orthology (KO) [BR:gmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmi03400]
    NMP99_02130
Enzymes [BR:gmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NMP99_02130
    5.6.2.6  RNA 3'-5' helicase
     NMP99_02130
DNA repair and recombination proteins [BR:gmi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NMP99_02130
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_22 PhoH
Other DBs
NCBI-ProteinID: UTT40133
LinkDB
Position
complement(465053..469717)
AA seq 1554 aa
MSDVLSRFGAATRKWFTDVFSAPTVAQSGAWESISDGKHTLVIAPTGSGKTLAAFLWALD
RLHHAELDTPALPGLESDADHPTGNGTKVLYISPLKALGVDVERNLRSPLAGIRATAHEM
GLSQPSVSVGVRSGDTPANDRRKLLKDPPEILITTPESLYLMLTSQARKTLSQVHTVIID
EVHAIANTKRGTHLALSLERLDALLPTPAQRIGLSATVEPPEEVARFLAGSAPVNIVRPP
SIKKWELAVRVPVEDMTDLPSAAGAHDLGPGSSPAASASIWPHVENQLVDLVLENHSTII
FANSRRLAERLTGRLNEIYAEREGFSAEDTSTSSPAVLMAQAGSTAASNPEAPLLARAHH
GSVSKDARAQIEEDLKLGKLRAVVATSSLELGIDMGLVDLVIQVESPNSVSSGLQRVGRA
GHQVGSVSQGIFFPKHRADLLSTALVVTRMRQGSIEKMVIPANPLDVLAQQTLAAVAMED
LEVEKWFETVRRSAPYQQLPRSAYLATLDMLSGKYPSDEFATLKPRLIWDRDAGTLSARP
GAQRLAVISGGTIPDRGLFGVFLAGAEDDKAPKRVGELDEEMVYESRVGDVFALGATSWR
IEDITHDRVLVTPAFGQPGKLPFWHGDGLGRPVELGAALGEFTTSLLASERTEASEVLRA
GGLDDFAANNLLNYLGEQRRATGQVPNHQNFVIERFHDELGDWRVILHSPFGLAVHAPWA
LAVGARVRERWGLDASAMAADDGIVLRIPAMDDQAPGADLFAFEADEIIDVVTSQVANSA
LFASRFRECAARALLLPRINPSKRTPLWQQRQRASQLLDVARNYPDFPIILETVRECLND
VYDLPALSAILSKVSSRAIRLVEVTTELPSPFAQSLLFGYVAQFLYESDAPLAERRAAAL
SLDPVLLGELLGRNDVREILDPQVIAGLQEQLQYRAENRRLAGMEGAADLLRLLGPLSIE
QLAARLRDPNDDSAPLDPAMAREHAESLVATRRAFTLRQNGALAYAAIEDAGKLRDALGT
PLPTGIPAAFLEPVADPIQDLISRFARTHVPFTLTEIATELSLGVAVLRPILDQLVAAGR
LSVGAFRPVEIVPEGISGDEYCDVQVLRTIRTRSLAALRAEVEPVDQNTYARFLPSWQQV
GSTLSGADGVYEIVAQLAGAEVPASALESFILPARLKGYQSSWLDELCSAGDVLVCGAGA
SGGKDGWLSLHTAEHAALSLPTPDANDLQALDLRVLEAFEATGAYFAEELAARIHHPDKP
PVSATDIAESCWRLFWAGYISPDTLAPIRGYLAGGSTAHKIAKPAPRARAARLNRLSGLN
RLAQEQGGSPMRGPRGSARWSLLPQPVADPTISAHATAEIMLERYGVLTRGSVAAEAVPG
GFGQLYRVLSKLEEAGHARRGYFVEKLGAAQFSTSTTIDRLRGYQLSEDPRRQPVAVVLA
STDPANPYGAALGWPTTQTGHRPGRKAGAIVGLLDGQLCFYLERGGRTVLTFAQLPEESW
NIIAMHLVAALRTAKVEKIAIATVDGQPVLDHPVGTALLAAGFYSTPQGIRFRR
NT seq 4665 nt   +upstreamnt  +downstreamnt
atgagtgatgtgctttcccggtttggtgcggccacccgcaagtggttcaccgatgtcttc
tctgcgcccaccgttgcgcaaagcggcgcctgggaatccatctccgacgggaagcacacc
ctagtcatcgctccaacgggttcaggtaaaaccttggccgcattcctctgggctttggac
cggttacaccatgcagaactagacactccagcattgcctggcctggaatccgatgcggat
catccgacaggcaacggcaccaaggtcctctatatttctccgctgaaagccttgggcgta
gacgttgagcgcaacttgcgttccccactcgccggcatccgcgccaccgctcatgaaatg
ggcttgtcccagccttcggtttcggtgggtgtacgctcgggcgatactccggctaacgac
cgacgcaagctgctcaaggatccgccggaaatcctgatcactacgcctgagtcgctgtac
ctgatgctcaccagccaagcccgcaaaaccttgtcccaagtgcatacggtcatcatcgat
gaagtccacgccatcgccaataccaagcgcggcacccacctggcattgtccttggaacgc
ctcgatgcgttgctccccactccggcccaacgcattggcctatcagccacggtggaaccg
cccgaggaagtcgcccgcttcctggcgggttcagcaccggtgaatatcgtgcgccccccg
tccatcaagaagtgggagctggcggtgcgcgtcccggtcgaggacatgaccgatctgcct
tcggcagctggtgcccacgatctgggacctggctcctcccccgcagcatcggccagcatc
tggccgcacgtggaaaaccagctggtggacctggtgctggaaaaccactcaacgatcatc
ttcgccaactcccgaagattggccgagcgtctcaccggacggctcaacgaaatctacgcc
gaacgcgagggattcagcgccgaggatacttccacctcttccccagccgtattaatggcc
caggccggatccaccgcggcttcgaacccggaagcgcccctgctcgcccgagcccatcac
ggctcggtctccaaagatgctcgcgcccagattgaagaggatctgaagctgggcaagctg
cgcgccgtggtcgccaccagctcactggaactgggcatcgacatgggtctggtggatctg
gtcatccaggtcgagtcccccaactccgtctcctccggcctgcaacgcgtgggccgtgca
ggacaccaagttggttctgtttcccaaggcatcttcttccccaagcaccgcgccgacctg
ctctccaccgcgctggtggtcacgcgcatgcgccagggatccatcgaaaaaatggtcatc
ccggccaacccgctggacgtgttggcccagcagaccttggcggcggtggccatggaagat
ctggaagttgagaaatggttcgagaccgtacgccggtcagcgccctaccagcagcttccg
cgcagcgcctatctagccaccttggacatgctttcgggcaagtacccctccgatgaattt
gccacgctcaaaccacgactgatctgggaccgtgacgccggcacgctctctgcccgcccc
ggcgcccagcgcctcgcagtcatttccggcggcaccatcccggaccgcgggctttttggc
gtcttccttgccggtgccgaagacgacaaggcacccaagcgcgtaggcgagctggatgag
gaaatggtctacgagtcgcgggtgggtgacgtctttgccctcggcgcgaccagctggcgc
atcgaagacatcacccatgaccgggtattggtcaccccggccttcggacaacccggaaag
cttccgttctggcacggtgatggactgggccgcccggtggaactcggcgcagccttgggt
gaattcactaccagcctgctggccagcgaacgcaccgaagcgtcagaagtcttgcgtgcc
ggtgggctggatgacttcgcagccaataacctgctgaattacttgggcgaacagcgcagg
gctaccggccaggtgccgaaccatcagaacttcgtgatcgagcgtttccatgatgagctc
ggcgattggcgagtcatcctgcactcccccttcggcctggcagtccacgccccgtgggca
ctggccgtgggtgcgcgcgtacgcgaacgctgggggctggatgcctcggcgatggccgcc
gatgatggcattgtgctgcgcattccggccatggatgaccaagcacccggagcggacctt
tttgcttttgaagccgatgaaatcatcgacgtggtcacctcgcaggtggcgaattctgcg
ttgttcgcttcccgcttccgcgaatgcgcggctcgcgccttgttgcttccccggattaac
ccgagcaagcgcacgccattgtggcagcagcgccaacgggcgagccagctgctggatgta
gctcggaattacccggatttcccgatcatccttgaaaccgtacgcgagtgcctgaatgac
gtttatgatctgccggctttgtctgcgattctgtccaaggtctcttcacgcgccatccgg
ctggtcgaagtcactaccgagttgccttctcctttcgcccaatccctgctctttggctat
gttgcgcagttcctctatgagtctgatgcaccgctagccgaacgccgcgcggcagcacta
agcctggatccggtattgctcggcgaattgctgggccgcaatgacgtccgtgaaatcctt
gatcctcaagtcatcgctggactgcaggaacagttgcagtatcgggcggaaaaccggcgg
ttggccggcatggaaggcgcagccgacctgttgcgccttctgggacctttgagcatcgaa
cagctggccgcccggctccgagatccgaatgatgacagcgcgccacttgatcccgctatg
gctagggaacatgccgagtcgctggttgccacccggcgtgccttcaccctgcgccaaaat
ggcgccttggcctatgcggcgatcgaagatgccggcaagctgcgtgatgccctgggcacc
ccattgcccaccggaattcctgccgcgttcttggagccggtggctgaccctatccaggat
ctgatctcgcgcttcgcccgcacccatgttccttttacgctcaccgaaatcgcgaccgag
ctgtcgctgggtgttgcagtactgcgaccaatactcgaccagctggtagccgctggccgg
ttatcggtcggagctttccgtccggtggaaattgtccccgaaggcattagcggtgatgaa
tactgcgacgtccaggtgctgcgcaccatccgcaccaggtccttggcggccttgcgcgcc
gaggtggaacctgttgatcaaaatacctatgcccggttccttccgtcctggcagcaggta
ggttcaacgctcagcggcgccgacggagtttatgaaatcgtagcccagctagcaggggcc
gaagttcccgcttcagcactggagtccttcatccttcctgcccggctcaagggataccag
agctcctggctcgatgaactgtgcagcgcaggggatgtcctggtgtgcggcgccggagcg
tccggtggcaaagacggctggttgtcattgcataccgcggagcacgcagcactctccctg
ccgacccctgacgcgaacgacctgcaggcactggatctgcgcgtacttgaagcctttgaa
gcgaccggcgcctactttgctgaagaactggccgcccgtatccaccatccggataagcct
ccggtaagtgccaccgatattgccgaatcctgctggcgcctgttctgggcaggctatatt
tcgcctgacacgctggccccgattcgcggttacttggcgggcggaagcactgcgcacaag
atcgccaagccagcaccgcgggccagggccgcccggctgaaccggctctcgggcctgaac
cggctggcacaggaacagggcggctctccgatgcgcggtccgcgtggttcagcacgctgg
tccttgcttccccaaccggtggcggacccgactatttccgcgcatgctaccgccgaaatc
atgctggagcgatatggtgtgctcacccgcggctcagtcgcagctgaagcagtaccaggc
ggtttcggccagctctaccgggtgctgtccaagctggaagaggccgggcatgcccgacgc
ggctacttcgtggaaaagctgggcgcggcccaattctccacttccaccacgatcgaccgt
ttgcgtggatatcagctatccgaggatccgcgtcgccagcccgtcgcggtggtcctcgca
tccaccgacccggccaatccttacggtgctgcgctgggctggccaaccacgcaaaccgga
catcgccccggacgcaaggcaggagccatcgtcggattgctggatggccaattgtgcttc
tatcttgaacgcggcggtcgcacggtattgacctttgcccagcttcccgaagaatcatgg
aacatcatcgccatgcacttggtggcagccctgcgtacggcgaaggtggagaaaatcgct
atcgccaccgtggacggacaaccggttcttgaccatccagtgggaacagcgctgctggca
gccggcttctattcaacgccgcaaggcattcgattccggcgctga

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