Glutamicibacter mishrai: NMP99_10235
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Entry
NMP99_10235 CDS
T08378
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gmi
Glutamicibacter mishrai
Brite
KEGG Orthology (KO) [BR:
gmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmi03016
]
NMP99_10235
Enzymes [BR:
gmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NMP99_10235
Transfer RNA biogenesis [BR:
gmi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NMP99_10235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DltD
Motif
Other DBs
NCBI-ProteinID:
UTT38429
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All DBs
Position
2159554..2160804
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AA seq
416 aa
AA seq
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MPNSDSAPSASTAAGIEPAEPVLTPLTRPRDGIPEVINTQVALRRAVRELSAGTGDLAVD
TERASGFRYGQRAFLLQIRREGAGTWLIDPEVLDDLGELRDFVNQQPWILHAATQDLPCL
HELGMSPTSLFDTELAGRLAGFPRVSLGTMVAELLGLQLAKEHSAVDWSTRPLPESWLNY
AALDVEVLEELRQEITKVLEEQGKMEFALQEFEYERNLPDPQPAEEPWRKLSGIHKLKGR
RNLAIARELWLSREALARSQDTAPGRLLPDRAIMAAIEQKASSVPALLQISGFHTRHAKR
DAPRWMDAIQRGRNTRDLPELRSAKPGLPHPRSWAEKNPAAALRLDAAKVVLGELNEQWN
IPAENLLTPKYLRELCWNPPALISVETVAQKLESLGARPWQRELLSPGFAQAFATV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccgaattctgactccgccccttccgcatcaaccgccgctggcattgagcccgccgaa
cccgtgttgactccgctcacccgtcctcgcgacggcatcccggaagtcatcaacacccag
gtggccctgcgccgggcggtacgggaactcagcgcgggaaccggcgatctggccgtggat
accgaacgagccagcggattccgctacgggcaacgcgccttcctgctccagatccgccgc
gaaggcgctggcacctggctgatcgaccccgaggtattggatgatctgggcgagctgcgc
gacttcgtcaaccagcagccgtggatcctgcacgccgcaacccaggatttgccgtgcctc
cacgaattgggcatgtcccccacttccttattcgataccgaattggccggccggcttgcc
gggttcccccgcgtttcactgggcaccatggtcgccgaattactaggcctgcaactagcc
aaggagcattcggcagtggattggtccactcgcccgctgcctgaatcgtggctgaactat
gcggctttggacgtagaggtcctcgaagagctgcgccaggaaatcaccaaggtcctcgaa
gagcagggcaagatggagttcgcgctgcaggagttcgagtatgagcggaacctgcctgat
ccgcagccagccgaggaaccatggcgcaagctctcgggaatccacaagctcaaggggcgg
cgtaatctggcgatcgcccgcgagctgtggctctcgcgcgaagccctggcccgcagccag
gatactgccccgggccgattgctgcctgatcgcgccatcatggccgcgatcgagcagaag
gcctccagcgttccggcattgctgcagatctctggattccacacccgccacgcgaagcgt
gatgccccacgctggatggacgcgattcagcgcggccgcaacacccgggatttgcctgaa
ttgcgctcggccaagcccgggttgccccatccccgatcctgggcggagaagaatcctgct
gccgccctccgcctggacgcggccaaggttgtgctcggcgagctgaatgaacagtggaat
atcccagccgagaatctgttgactcccaaatatctgcgcgagttgtgctggaacccgcca
gcgttgatcagcgtggaaaccgtcgcgcaaaagctggagtcgctgggggctcgaccatgg
cagcgagagctgctgtccccaggtttcgcgcaggctttcgccaccgtttag
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