Glutamicibacter mishrai: NMP99_10915
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Entry
NMP99_10915 CDS
T08378
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gmi
Glutamicibacter mishrai
Pathway
gmi03420
Nucleotide excision repair
gmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NMP99_10915
03430 Mismatch repair
NMP99_10915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmi03400
]
NMP99_10915
Enzymes [BR:
gmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMP99_10915
DNA repair and recombination proteins [BR:
gmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMP99_10915
MMR (mismatch excision repair)
Other MMR factors
NMP99_10915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
UTT38557
LinkDB
All DBs
Position
complement(2319071..2322385)
Genome browser
AA seq
1104 aa
AA seq
DB search
MSTIKYSPQELSQALGEKFPPTEQQAEIIAAPLEPMLVIAGAGSGKTKTMADKVVWLVAN
QLVRPEQILGVTFTRKAAGELSLRIRAKIAQLVAAGLLSQEETRDFLDPAVSTYHSYANT
LVQDHGLRLGLEEDSALLGAAQSWQLAHSVLEKYTGDYQHLNSASSTLIDAIVSFSSEAS
EHLATAPEARQWIDDLVSTLRALPMDAEKDKAPTQAALKLIDKLASRATIAELAEEYTRE
KKRLGVMDYGDLVAHAARIAQEVPAAALAERTSHQVVLLDEFQDTSHAQMVLFSQLYGQG
HPVTAVGDPNQSIYGFRGASAGQLFRFPETFPIVRGEQREIAHVKHLTIAWRNTVNVLSA
ANQITAGGAAHSGPVTVKPLEPSAFAQPGRVVLNRCATVRQEAEAIADLIEAEHQRDPQA
EKTSAVLSRNRSQLGIMGEVLAQRGIRYQLVGLSGLLSTPEVTDLVACLHVLVDPLRSDK
LMRLLAGARWRMGAADLAAFADWSRQLERRRSHGLRSSGAITEESAEAEAVETARAELND
AASLIEALDFLPTEGWSSSDGRSLSTEGRIRLAALKEELASLRLMANDDLETLIREVERA
MNLDIEVAVRPWVERDVSRANLDAFADVVREYCRNAPRVELAGFLMWLEQAAEKEKGLPL
PSEDADPQAVQLLTVHASKGLEWDIVAVMSLNDGVFPGAQSDRWTSGDKALPWPLRGDAK
DLPQWDTDQQALKELLEAESLFKDQVEDHHIDEERRLAYVAVTRAKSLLICSSSIWTATR
SKPTEASEFFTALKPLAEGPDPKAEIGIWVDEEDAPEQNPNRLTPLEALWPYDPLDGPQV
TGGMHDSESAYSRRAVVQEIADDVLAAQEGYQPVSVEGQQWLDEAQKLLAQREFLSNRER
SIEAPEHVRASLFVELAEDPISVLENLRRPVPRRPGLAARRGTAFHAWIEEFYEKTSMLD
LGDLVEPADSYLDEALDLESMKEAFLASEWAQLQPAYVEVPLETRVGPVAVRGRIDAVFQ
MDDGTWLLLDWKTGRVPHGKDLKSKLVQLAVYRLGWSRLHGIELDDIKAAFYYVAAGITV
RAEHLSDEAELEAMISSAFEQLES
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcaagtacagccctcaagaactgtcgcaggcattaggggagaaattccct
cctaccgagcagcaggcagaaatcatcgccgccccgctggaaccgatgctagtcatcgct
ggagcaggctccggaaaaaccaaaaccatggccgacaaagttgtctggctggttgccaac
caactagtgcgtccagaacaaatcctcggtgtcaccttcacccgcaaagccgcgggagaa
ctgtctttgcgaatccgggccaagatcgcccagctcgtagccgcaggactattgagccag
gaagagactcgcgacttcctcgacccagccgtttccacctatcactcctacgccaacacc
ttggtccaggatcatgggctgcgtctggggctggaggaagacagtgccctgcttggcgca
gcccaatcatggcagctggcacattccgtattggagaaatacacgggggactaccagcac
ttgaacagtgccagcagtacccttatcgatgccatcgtctccttcagctccgaagcctcc
gaacatctggccactgccccggaagcccgccaatggatcgatgacctcgtatcaacgctg
cgagccctgcccatggatgcggaaaaggacaaagccccgacgcaggcagcattgaagctc
atcgacaaactcgcatcgagagcaaccatcgctgaattggccgaggaatatacgcgcgaa
aagaagcggctgggcgtgatggactacggagacctcgtcgcccacgcggccaggatcgca
caggaagtccctgccgccgcgctcgccgaacgaacgagccatcaagtcgtgctgcttgat
gaatttcaagacacatcccacgcgcagatggtgctcttctcacagctctacgggcagggc
cacccggtgaccgctgtgggcgaccccaatcaatcgatctacggcttccgaggcgcgagc
gccgggcagctgttccggttccccgaaaccttccccatcgttcgcggggagcagcgcgaa
atcgcccacgtcaagcacctgacgatcgcctggcgcaatacggtgaacgtgctgtcggcg
gccaaccagattactgccgggggagccgcccactctggaccggtcactgtcaagcctttg
gaaccgtccgcttttgcccagccagggcgcgtagtgctcaaccggtgtgcaacagtccgc
caggaagccgaagcgattgcggacctgattgaggccgagcatcaacgtgatccccaggcg
gaaaaaacgagcgcagtgctttcgcgaaaccgcagccagctgggcatcatgggcgaggtg
ctcgcccagcgtggtattcgataccagttggtgggattatcagggctattgagcactccc
gaggttaccgaccttgtggcgtgcctccatgttctggtggatccattgcgctcggacaag
ctgatgcgcctgctcgccggagccaggtggcgcatgggcgctgccgaccttgcagcattc
gccgactggtcacgacaactcgaacggcgtcgctcccacggattgcggtccagtggcgcc
atcacggaagaatccgctgaggctgaagctgtcgaaacagcgagagcagagctcaacgat
gccgccagcctcattgaagcactggactttctgcctacggaagggtggagtagctcagat
ggcagaagcctgagcaccgagggcagaatccgattagctgccctgaaagaagagctggct
tcattgcgcttgatggccaacgatgacttggaaaccctgatccgagaagtcgagcgggcc
atgaatctcgatattgaagtagcagtacgtccgtgggtcgagcgcgatgtttcgcgggca
aaccttgatgcttttgccgatgtcgttcgcgaatattgccgcaacgctccacgagtggag
ctcgccggattcctgatgtggctggagcaagccgccgaaaaagaaaaaggcttgccactg
cccagcgaggatgcggatccccaggcggtgcagttgctgaccgtccacgcctcgaaaggc
ttggaatgggacattgttgctgtgatgtccttgaatgacggagtcttcccgggcgcccaa
tcagatcgatggaccagtggggataaagcgctgccgtggccgctgcgcggtgatgccaag
gacctgccgcagtgggacacggatcaacaggcgctcaaggagctcctggaagctgaatcc
ctgttcaaggatcaggttgaagaccaccatatcgatgaggaacgccggctggcctacgtt
gcggtcacccgtgccaagtccctgctgatctgcagcagcagcatttggacggcgacgcga
agcaagcctaccgaggcttcagagttcttcacggcgttgaagcctctggccgaggggcct
gatccaaaagcggaaatcggaatctgggttgatgaagaggatgcgcccgagcagaacccc
aataggctgaccccgctggaagccctatggccttatgatcctttggacgggccacaggtt
accggcggcatgcacgatagcgaatcggcctattcgcgacgagcggttgtccaagaaatc
gctgatgatgtcttggcagcgcaggaaggttatcagcctgtgagcgtcgaggggcagcag
tggcttgatgaggcccagaagcttctggcccagcgtgaattcctcagcaaccgcgagcga
tccatcgaagctccggaacatgtacgcgcctcgctgttcgttgaattggccgaagacccg
atctcggtcttggagaatcttcgccggcctgtgccgcgacgcccagggctggcagcccgc
agaggcacggcattccacgcatggattgaggaattctacgaaaagacctcgatgcttgat
ctcggggatcttgtcgaacccgcggacagctatctggatgaagccctggacctggaatca
atgaaggaagcattcctcgccagcgaatgggcgcaactgcagccagcctacgtcgaggtt
ccattggagactcgcgtcggaccggtggcggtgcgaggcagaattgatgccgtcttccaa
atggacgatggcacttggctgttgctggactggaagaccggacgcgtcccgcatggaaaa
gacttgaagagcaaattggttcagctcgcggtctaccgcctgggatggtcgcgcctgcat
ggcatcgagcttgatgatatcaaggcagcgttctactacgtcgcggccggcatcaccgtg
cgtgcagaacacctgtccgatgaagcggagctggaagcaatgatctccagcgcgttcgag
cagctcgaaagctaa
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