Gloeobacter morelensis: ISF26_16310
Help
Entry
ISF26_16310 CDS
T07869
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gml
Gloeobacter morelensis
Brite
KEGG Orthology (KO) [BR:
gml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gml03009
]
ISF26_16310 (rlmD)
Enzymes [BR:
gml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ISF26_16310 (rlmD)
Ribosome biogenesis [BR:
gml03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ISF26_16310 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
Methyltransf_15
Cons_hypoth95
Methyltransf_11
UPF0020
RrnaAD
Methyltransf_32
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UFP93353
LinkDB
All DBs
Position
3409895..3411268
Genome browser
AA seq
457 aa
AA seq
DB search
MVGRPVEPGALLQGQTVTVPITALAAGGDGIARLTDGRVLFVAGTVPGDTVEARLVHLKK
DHAFGRILQIVQASPHRIEAPCPVAERCGSCQWQWIDYPFQLEAKQRQVREALEHLGGFA
EPPVEPVIAQPRPFGYRNKSTFPIGRDARGEPVIGYYQKDSHRIVPLDACPVQDSRLDPL
LAAARELIRVQGWSIYDEKHHRGALRHLGLRIGERTGQKLLTFVVNGQTLSGIKPAAQAL
MDRFPDLVGVCLNTHTERGNTIFGPQTRCVMGQDFIEDVLDGFRFRIEPTTFFQICAAQA
EILARLVVQKAAATCDQTVIDAYCGIGTLSLPLARSARSVVGIESHVRSVEQARCNARIN
GVENCRFEAGTVEALLPDLKADIVVVDPPRKGCDPAVLAAILGSLPLRVIYVSCNPATLA
RDLRQLVAGGYRLVRVQPVDLFAQTHHVECVATLERP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtggggcgtccagtagaacccggtgccctcctgcaggggcaaaccgtcactgtcccc
atcacggccctggctgcagggggcgatgggatcgcccggctcaccgacggccgggtgctc
tttgtggcagggacggtacccggtgacaccgtcgaagcgcggctggtacacctcaaaaag
gaccacgctttcggcaggatcctgcagattgtgcaagcctcgccccaccgcatcgaagcc
ccttgcccggtggccgaacgctgcggcagttgccagtggcaatggatcgattacccgttt
caactggaggcgaagcagcggcaggtgcgcgaggcgctcgaacacctgggcgggttcgca
gagccgccggtggagccggtcattgcccagccgcgcccgtttggctaccgcaacaaatcg
actttcccgatcggccgggatgcccgcggtgaacctgtcatcggctactaccagaaagat
tcgcaccggatcgtgccgctcgatgcctgtccggtgcaggatagccgccttgacccgttg
ctcgcggcggcgcgcgaattgatccgcgtccagggctggagcatttacgacgaaaagcac
caccgcggcgccctgcgccatctgggtctgcgcatcggcgagcgcacgggccagaaattg
cttacctttgtggtgaacggccagaccctctcggggatcaagcccgccgcccaggcactg
atggaccgcttccccgacctggtgggggtctgcctcaatacccacaccgagcgcggcaat
acgatctttggtccccagacccgctgcgtgatgggccaggactttatcgaagatgtgctg
gacggctttcgctttcgcatcgagcccacgacgttttttcagatctgcgccgcccaggcg
gaaattctcgcccgcctggtggtccaaaaggcggcagccacctgcgatcagaccgtgatc
gacgcctactgcggcatcggcacgctgagtctgcccctggcgcgctccgcccgctcggtg
gtcggcatcgaaagccatgtccgttcagtggagcaggcccggtgcaatgctcggatcaac
ggtgtcgagaattgccgctttgaagccggcacagtcgaggcgctgctgccggatctgaag
gccgatatcgtcgtggtcgatccgccgcgcaagggctgtgacccggcggtgctcgcagcg
atcttgggctcgttgccgctgcgggtgatctacgtcagttgcaatcccgccaccctcgcg
cgcgacctgcggcagttggtggcgggaggctatcgcctggtgcgcgtgcagccggtggac
ctgtttgcccagacccaccacgtcgagtgcgtggcgacgctggagcgtccgtag
DBGET
integrated database retrieval system
