Gloeobacter morelensis: ISF26_19740
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Entry
ISF26_19740 CDS
T07869
Symbol
rpoC1
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gml
Gloeobacter morelensis
Pathway
gml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ISF26_19740 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gml03021
]
ISF26_19740 (rpoC1)
03400 DNA repair and recombination proteins [BR:
gml03400
]
ISF26_19740 (rpoC1)
Enzymes [BR:
gml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ISF26_19740 (rpoC1)
Transcription machinery [BR:
gml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ISF26_19740 (rpoC1)
DNA repair and recombination proteins [BR:
gml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ISF26_19740 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
UFP93972
LinkDB
All DBs
Position
4150942..4152768
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AA seq
608 aa
AA seq
DB search
MPRMEQRFDYIKISLASPERVMAWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPSKDWECYCGKYKRVRHRGIVCERCGVEVTESKVRRHRMGYIKLAAPVTHVWYLKGI
PSYISTLLDMPLRDVEQVVYFNAYVVLNPGNAENLYYKQLLTEDQYIEVEDQIFAEDSSL
ELPEGWAKMGAEAIHELLAAIEMESEAERLREDLGESKGQKRTKLIKRLRVLDNFIATGS
RPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIV
RNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPKLKLHQCGLPKEMAIELFQPFVIHKLIQRGLVNNIKAAKKMIQRNDARIWSVL
DEVITGHPVLLNRAPTLHRLGIQAFEPILVSGRAIQLHPLVCTAFNADFDGDQMAVHVPL
SLESQAEARLLMLASNNVLSPATGRPIITPTQDMVLGCYYLTVDNPDATKGSGKYFSSSE
DAVIAYNQGMIDLHAKIWLRFEGEVETDNPEDLRVRRDEKGNVLSQFVRTTVGRIIFNQV
IQETLVAS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatggaacagcgtttcgattacatcaagatctctcttgcctccccggagcgg
gtcatggcctgggggcaacgcaccctccccaacggccaggtcgtgggggaagtgaccaaa
cccgagacgatcaactaccgcaccctcaagcccgagatggacgggcttttttgtgagcgt
atctttgggccttccaaagactgggagtgctactgcggcaaatacaagcgcgtgcgccac
cggggcatcgtctgcgagcgctgcggcgtcgaggtcaccgaatcgaaggtgcgccgccac
cgcatgggctatatcaagctcgccgccccagtcacccatgtctggtacctaaagggcatt
ccttcgtatatttcgacgctgctcgatatgcccctgcgcgacgtcgagcaggtggtctac
ttcaatgcctacgtggtgctcaatccgggcaacgccgagaacctctactacaaacagctg
ctcaccgaggaccagtacatcgaggtcgaagatcagatcttcgccgaggattcgagtctg
gaactgcccgagggctgggcgaagatgggggccgaagcgattcacgaactgctcgcggcc
atcgagatggagtctgaagccgagcggctgcgcgaggatctaggtgagtcgaagggccag
aagcgcaccaaactcatcaagcgcctgcgggtgctcgacaacttcatcgccaccggttcg
cggccggagtggatggtgctgactgccatcccggtgatcccgccggatctaagaccaatg
gtgcagctcgacggcggccgttttgccacttctgatctcaatgacctctaccgccgggtg
atcaaccgcaacaatcgcctggcgcggttgcaggagatcctggcgcccgagatcatcgtg
cgcaacgaaaagcgcatgctccaggaggcggtggacgcgctcatcgacaacggccggcgc
ggccgcacggtggtcggcgccaacaaccggcccctcaagtcgctctcggatatcatcgag
ggcaagcagggccgctttcgccagaacctgctcggtaagcgcgtcgactactcgggccgc
tcggtgatcgtcgtcggccccaagctcaagctccaccagtgcggcctgcccaaggaaatg
gccatcgagctgtttcagccgtttgtcatccacaaactcatccagcgcggcctggtcaac
aacatcaaagccgccaaaaagatgatccagcgcaacgacgcgcgcatctggagcgtgctc
gacgaggtgatcaccggccacccggtgctcctcaaccgcgcgcccacgcttcaccgtctg
ggtatccaggcgtttgagccgattctggtctccggtcgcgccattcagctccatccgctg
gtgtgcacagccttcaacgccgacttcgacggcgaccagatggcggtgcacgtgccgctg
tcgctggagtcgcaggcggaggcgcgcctgttgatgctcgcttccaacaacgtgctctcg
cctgccaccggtcggccgatcatcacccctacccaggacatggtgctcggttgctactac
ctgacggtcgataaccccgacgccaccaaaggctccggcaagtacttcagcagcagcgaa
gacgccgtgatcgcctacaaccagggcatgatcgacctgcacgccaagatctggctgcgc
tttgagggcgaggtcgaaaccgacaaccccgaggatttgcgcgtgcgccgcgacgagaag
ggcaacgtgctctcgcagttcgtgcgcaccaccgtcggccgcatcatcttcaaccaggtc
attcaagaaacgcttgtcgccagctag
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