Gloeobacter morelensis: ISF26_23015
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Entry
ISF26_23015 CDS
T07869
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gml
Gloeobacter morelensis
Pathway
gml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISF26_23015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gml03019
]
ISF26_23015
03009 Ribosome biogenesis [BR:
gml03009
]
ISF26_23015
Enzymes [BR:
gml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ISF26_23015
Messenger RNA biogenesis [BR:
gml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISF26_23015
Ribosome biogenesis [BR:
gml03009
]
Prokaryotic type
rRNA helicases
ISF26_23015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
CMS1
AAA_22
Flavi_DEAD
Thump_like
P-loop_SecA
Helicase_RecD
adh_short
DUF7117
Motif
Other DBs
NCBI-ProteinID:
UFP94571
LinkDB
All DBs
Position
4790698..4792011
Genome browser
AA seq
437 aa
AA seq
DB search
MATAFSALGLSEPVVKALDELGFEQPTPIQQKSIPFLLDGRDLLAQAQTGTGKTAAFGLP
LVDRSDPQDARVQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRRLRA
GAQIVVGTPGRVLDLMRRSSLDLTALRTLVLDEADQMLDMGFIEEVQTILDAAPPERQLV
FFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRVLAAED
PASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVVVATDV
AARGLDIADLSHVINYDLPQDGESYIHRIGRTGRAGRSGVAISFALPTDRYRLRLIERAT
GSTLVPAKIPSAGEIQVRRTERLVEQLRRQLQADESDPNLVLYREVVGQLREEFDLGDIA
ATFLKLAQQRPGSTGSG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcattttcggcactcgggctcagcgagcccgtggtgaaggcgctcgacgaa
ctcggcttcgagcagccgactccgattcaacaaaagagcattccctttttgctggacggc
cgcgacctgctcgcccaggcccagaccggcaccggcaagacggcggctttcggcctgccg
ctggtcgatcgttcagacccccaggacgcccgggtgcaggcgctggtgctcgcccccacc
cgcgaactggccgtgcaggtgtgcgaagccattcatacctacagcaagcactcgggtgtg
cgggtgctgcccatctacggcggccagcccatcgaccgccagatgcgccgtctgcgggcc
ggtgcgcagatcgtggtgggtactcccgggcgggtgctcgatctgatgcgccgcagcagt
ctcgatctgaccgcactgcgcacgctggtgctcgacgaagccgaccagatgctggatatg
ggctttatcgaggaagtccagaccattcttgatgcggctcccccggagcggcaactggtc
ttcttctcagcgacgctgcctgccagtatccgcaaactcgccgcccgccacctgcgcacg
ccgatgacgctcaccatgcccgccgaggagcgcgataccccagccatcgcccagcgggtc
tacttcgtcaacttcaaaaaccgcgcccaggctctcacccgcgtgctcgcggccgaagat
ccggcctcggccttgatttttacccgcaccaaacaggcggcggacgaactggccgagcaa
ctgcaggacgacggccaccgcgccgaggccctgcacggggatctcaaccagagtgcgcgc
gaggcggtgctgggccgctttcgccgccagcagctcaacgtggtggtggcgaccgatgtt
gccgcccgcggcctcgacatcgccgatctcagccatgtgatcaactacgacctgccccag
gacggcgaatcgtacatccaccgcatcggccgcaccggccgggcggggcgcagcggggtc
gccatcagcttcgctctgcccaccgaccgctaccgtttgcggctgatcgaacgggcgacc
ggttcgacgctcgttccagccaaaattccctcggcgggagaaatccaggtgcggcgcacc
gaacgcctcgtcgagcagttgcgcaggcagttgcaggcggacgagagtgatccgaatctt
gtactttaccgcgaggtcgtggggcagttgcgcgaggaattcgacttgggcgatattgcc
gccacgttcctcaaactcgcccagcaacggcccggcagtacagggagcggctga
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