Gulosibacter molinativorax: GMOLON4_2871
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Entry
GMOLON4_2871 CDS
T08641
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gmn
Gulosibacter molinativorax
Pathway
gmn03030
DNA replication
gmn03430
Mismatch repair
gmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMOLON4_2871 (holB)
03430 Mismatch repair
GMOLON4_2871 (holB)
03440 Homologous recombination
GMOLON4_2871 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmn03032
]
GMOLON4_2871 (holB)
03400 DNA repair and recombination proteins [BR:
gmn03400
]
GMOLON4_2871 (holB)
Enzymes [BR:
gmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMOLON4_2871 (holB)
DNA replication proteins [BR:
gmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GMOLON4_2871 (holB)
DNA repair and recombination proteins [BR:
gmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GMOLON4_2871 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
nSTAND_NTPase5
AAA_22
AAA_16
AAA_29
AAA_5
nSTAND3
DNApol3-delta_C
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QUY63545
LinkDB
All DBs
Position
3043835..3045001
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AA seq
388 aa
AA seq
DB search
MSVWNEVVGQPQAVETLQRAVRGSVRGSEDQQAFTNSWLITGPPGSGRSTAAYAFAAALL
CPNGGCGTCDSCIQVRQRSHPDLTAVVTETLIITIDTARELVARASRSPMNSNYRVIVVE
DADRMMERTSNTLLKAIEEPEPTTVWVLCAPSVTDLLPTIRSRVRTIGLHSPAVEDVAAL
LVRRHAVTEEVALRAAAESQSHVGMAARLVTTPAAWERRDRALNGVLGLRTVGDAVRKAA
EWVAIADEDGKAAAEDRDEKERQETFRSLGLDPNQTIPRQLRGVFRELEENQKRRAKRAT
LDGVDRILTDVQSLWRDTLMLQLDAGVRLVNETRRPEIESAARSGQPSSTMASIESISLV
RERLAANVPPTLALEGLLVGYVARQTQA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgtggaatgaggtcgtcggccagccgcaagcggtcgaaacgcttcagcgcgcc
gtgcgcggctccgttcgggggagtgaagatcagcaggctttcaccaactcttggctaatc
acagggcctccgggttcgggccgctcgacggccgcctacgcgtttgcggccgcgttgctg
tgcccgaacgggggctgtgggacgtgcgattcttgcatccaggtgcggcagcgctcgcac
cccgacctcacggccgtggtcaccgagacgctgatcatcacgatcgacaccgcgcgcgaa
ctcgtggcccgcgcatcgcgatccccgatgaactcgaactaccgagtcatcgtggtcgaa
gacgccgaccgcatgatggaacgcacctccaacaccctgcttaaggcaatcgaggagccc
gaaccgaccacggtgtgggtgctgtgcgccccgagcgtgaccgacctcttgccaacgatt
cgctcgcgcgtgcgcaccatcggcctccatagtccggcggtcgaggacgtcgcggcgctg
ctcgtgcgccgacacgctgtcacggaagaggtcgcgctgcgggccgccgccgagtcgcag
agccacgtcgggatggccgctcggcttgtcacgacgccggccgcgtgggagcgccgcgac
cgcgcgctgaacggcgtgctcgggctccgcacggtgggggatgcggtgcgcaaggccgcc
gagtgggtcgcgatcgcggacgaggacgggaaagcagctgccgaggaccgcgacgagaag
gagcggcaggagaccttccgctcgctcgggctggatccgaaccagaccatcccccgacag
ctgcgcggggtgtttcgcgagctcgaggagaaccagaagcggcgcgccaagcgagccacg
ctcgatggcgtggaccgcatcctgaccgacgtgcagtcgctgtggcgtgacacgctcatg
ctgcagttggatgccggggtacgccttgtgaacgagacgcggcggcctgaaattgaatct
gccgcccgctcaggtcagccgtcgtcgacgatggctagcattgagagcatcagcctcgtg
cgcgaacggctcgccgcgaatgtcccgccaaccctcgcgttggagggcctgctggttggc
tacgtcgcgagacaaacacaggcctga
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