Gulosibacter molinativorax: GMOLON4_2978
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Entry
GMOLON4_2978 CDS
T08641
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gmn
Gulosibacter molinativorax
Pathway
gmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GMOLON4_2978 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmn03021
]
GMOLON4_2978 (rpoC)
03400 DNA repair and recombination proteins [BR:
gmn03400
]
GMOLON4_2978 (rpoC)
Enzymes [BR:
gmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GMOLON4_2978 (rpoC)
Transcription machinery [BR:
gmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GMOLON4_2978 (rpoC)
DNA repair and recombination proteins [BR:
gmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GMOLON4_2978 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5446
Motif
Other DBs
NCBI-ProteinID:
QUY63651
LinkDB
All DBs
Position
3163565..3167455
Genome browser
AA seq
1296 aa
AA seq
DB search
MIDATKFDSLSIGLATTEDILGWSRGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIICERCGVEVTKSAVRRERMGHIKLAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVVSIDEEGRHDDLSDLEKEKNLEVQTRVNQRDSAINERLSTLEKE
IAALEEEGATADQLKKAKDAGEKDMARIRKELDRDIEQVERVWESFKNLKVGELKPDDAD
YAELEDRYGDYFEAHMGAEAIQNRLRDFDLETEAESLREQIQNGKGQKKIRAIKRLRVVN
AFLQTDNKPEAMVLDVIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRAVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLQMHQCGLPKQMALELFKPYVIKRLIDLGHASNIKAAKRSVERAK
PEVWDVLEEVIRERPVLLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLACSAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMVAGLYHLTFDREDAQGAGR
SFGSVAEAIMAQDEGSLHLNAPVTIRLEGLAFLPGEEPEGFVEGKPYALKTTLGRALFNE
LLPDTYPYLEDRMTKGRLSDVVNFLAERFDKDVVAATLDKIKDAGFYWATRSGISLSVAD
VVVPDTKDAIIAETEAKVAELREDYSMGLTTQGEYREKTIALWEAATERVAEDTREQFPD
TNSIHRMVTAGANGNWLQVRQIAGMRGIVANPKGEKIARPIIHSYREGLTVLEYFSSTHG
ARKGLADTALKTADSGYLTRRLVDVSQDVIIREVDCGTRKGLKLPISQVNAAGERELAEN
VENSVYARTLATDVVDADGQVLAQAGESVGDVLIERLFNANVEEVSVRSVLTCESQVGVC
SKCYGRSMASSHLADMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASGTDITQGLPRVQE
LFEARTPKGAANLAKFAGTISIQDTERSRKIILTPDAEDEEVMTYPVSKRSELFVEDGER
VEPGKQLVEGPLDPKEVLEVLGTTAVQKYLVKGVQEVYNSQGVPIHDKHIEVIVRQMLRK
VTINDSGETEMLPGELVDRQRFQAQNRQAVQDGQRPASGRPEVMGITKASLATESWLSAA
SFQETTRVLTQAAMEQKTDPLLGLKENVIIGRLITAGTGLPVYQNQVVEPTEEAIAERYP
YVESTEEFGDTLSYADFDAFSEGDNFDFGLDPSTNS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgcaaccaagtttgacagcctcagcattgggctggcgacgaccgaggacatc
ctcggctggtcacgtggcgaggtaaagaagcccgagaccattaactaccgaaccctcaag
cccgagaaggacggtctgttcggtgagcagatcttcggcccttcgcgcgactgggagtgt
gcctgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtt
gaggtcaccaagtcggcggttcgccgtgagcgcatgggccacatcaagctcgccgctccg
gtaacccacatttggtacttcaagggcgttccctcgcgcctcggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcctacatggtcgtctcgatcgac
gaggagggtcgccacgacgacctctcggacctcgagaaggagaagaaccttgaggtgcag
actcgcgtgaaccagcgcgactcggccatcaacgagcgcctctcgaccctcgaaaaggag
atcgcggctcttgaagaggaaggcgccaccgccgaccagctcaagaaggcgaaggatgca
ggcgagaaggacatggcccgcatccgcaaggaactcgaccgcgacattgagcaggtcgag
cgcgtctgggaatcgttcaagaacctcaaggttggcgaactgaagccggacgacgccgac
tacgccgagctcgaggaccgctacggcgactacttcgaggcccacatgggtgccgaggcg
atccagaaccgtctgcgtgactttgacctcgagaccgaggccgagtcgctgcgcgagcag
atccagaatggcaagggtcagaagaagatccgcgccatcaagcgcctccgtgtcgtgaac
gcgttcctgcagaccgacaacaagcccgaggccatggtgctcgacgtgatccccgtgatc
ccgccggaactgcgcccgatggtgcagcttgatggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctacagcgactgcttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtgccgtcaccggtaccggtaaccgagccctcaag
tccctcagcgacatgctgaagggtaagcagggtcgattccgtcagaacctgctcggtaag
cgcgttgactactcgggccgttcggtgatcatcgttggtccgcagctgcagatgcaccag
tgtggtctgccgaagcagatggcgctcgagctgttcaagccgtatgtcatcaagcgactc
atcgacctgggccacgcatccaacatcaaggccgcgaagcgctcggttgagcgtgcgaag
cccgaggtgtgggacgtcctcgaagaggtcatccgtgagcgccccgtgctgctgaaccgc
gcaccgaccctgcaccgcctgggtattcaggcgttcgagccgctgctcgttgagggtaag
gccattcagctgcacccgctcgcgtgctcggcgttcaacgctgacttcgacggtgaccag
atggcagtccacctgccgctgtcggtcgaggcacaggctgaagcccgcgtcctcatgctc
gcatcgaacaacatcctgaagccctcggacggtcgccccgtgaccctgccgtcgcaggac
atggtcgctggcctctaccacctgacgttcgatcgtgaggatgcgcagggtgccggtcgt
tcgttcggctcggttgccgaggcgatcatggcgcaggatgagggctcgctgcacctcaac
gcaccggtcaccatccgcctcgagggcctcgcgttcctcccgggcgaggagcccgagggc
ttcgtcgagggcaagccgtacgcgctcaagaccaccctcggccgcgcgctgttcaacgag
ctgctgcctgacacctacccgtacctcgaggaccggatgaccaagggtcgcctgtccgac
gtcgtaaacttcctcgcggagcgtttcgacaaggacgtggtggctgccaccctcgacaag
atcaaggacgccggcttctactgggccacgcgttcgggtatctcgctgtcggttgccgac
gtcgtcgtgcccgacacgaaggatgcgatcatcgccgagactgaggcgaaggttgcggag
cttcgtgaggactactcgatgggtctgaccacccagggcgagtaccgcgagaagacgatt
gccctgtgggaggccgcgactgagcgtgtggctgaagacacccgcgagcagttcccggac
accaactcgatccaccgaatggtgaccgctggtgctaacggtaactggctgcaggttcgt
cagatcgccggtatgcgcggcatcgtggccaacccgaagggtgagaagatcgctcgtccg
atcatccactcgtaccgtgagggcctcaccgttctcgagtacttctcgtcgacgcacggt
gcgcgtaagggtcttgccgacaccgcgctgaagaccgcggactcgggttacctgacgcgt
cgtctcgtcgacgtctcgcaggatgtcatcatccgcgaggtcgactgtggcactcgcaag
ggcctcaagctgccgatctcgcaggtcaacgccgccggtgagcgcgagctcgccgagaac
gtcgagaactccgtctacgcccgtacgctcgcgactgacgtcgtggatgcggatggtcag
gtgcttgcgcaggccggcgagtcggtcggtgacgtgctcatcgagcgcctcttcaacgcg
aacgtcgaggaagtttcggttcgttcggtgctgacctgtgagtcgcaggtcggtgtttgc
tcgaagtgctatggccgttcgatggcgtcgagccacctcgcggacatgggtgaggctgtc
ggtattatcgccgcgcagtccatcggtgagcccggtactcagctgacgatgcgtaccttc
cacaccggtggtgtggcctcgggtactgacatcacgcagggtctgccgcgtgttcaggag
ctcttcgaggcacgtaccccgaagggtgctgcgaacctcgcgaagtttgccggaaccatc
tcgatccaggacaccgagcgctcgcgcaagatcatcctgaccccggatgccgaggacgaa
gaggtcatgacctaccccgtctcgaagcgttcggaactgttcgtcgaggacggcgagcgc
gtcgagcccggcaaacagctcgttgagggcccgcttgaccccaaggaggtgctcgaggtt
ctcggtaccaccgcggtccagaagtacctcgtcaagggcgtgcaggaggtctacaacagc
cagggtgtgccgatccacgacaagcacatcgaggtcatcgttcgccagatgctccgcaag
gtcacgatcaacgactcgggtgagacagaaatgctcccgggtgagctcgttgaccgccag
cgcttccaggcccagaaccgccaggcggttcaggacggtcagcgcccggcctcgggtcgt
cccgaggtgatgggtatcacgaaggcgtcgctcgcgaccgaatcgtggctgtcggccgct
tcgttccaggagaccacccgcgtgcttacgcaggcggccatggagcagaagaccgacccg
ctgctcggcctcaaggagaacgtcatcatcggtcgtctcatcaccgctggtaccggtctg
ccggtctaccagaaccaggttgttgagcccaccgaagaggcgatcgcggagcgttacccc
tacgttgagtcgacggaggagttcggcgacaccctgtcgtacgccgacttcgacgcgttc
agcgagggtgacaacttcgacttcggcctcgacccgagcacgaacagctag
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