Gulosibacter molinativorax: GMOLON4_3228
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Entry
GMOLON4_3228 CDS
T08641
Symbol
xpbC
Name
(GenBank) DNA or RNA helicase of superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gmn
Gulosibacter molinativorax
Pathway
gmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GMOLON4_3228 (xpbC)
09124 Replication and repair
03420 Nucleotide excision repair
GMOLON4_3228 (xpbC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmn03021
]
GMOLON4_3228 (xpbC)
03400 DNA repair and recombination proteins [BR:
gmn03400
]
GMOLON4_3228 (xpbC)
Enzymes [BR:
gmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GMOLON4_3228 (xpbC)
Transcription machinery [BR:
gmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GMOLON4_3228 (xpbC)
DNA repair and recombination proteins [BR:
gmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GMOLON4_3228 (xpbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_3
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
AAA_22
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QUY63899
LinkDB
All DBs
Position
complement(3434349..3435989)
Genome browser
AA seq
546 aa
AA seq
DB search
MALGPLIVQSDRTVLLEVAHPDANDARHELAVFAELERAPEHVHTYRITRLGLWNARAAG
HTADEMLETLNKYAKFPVPESVAYDLRDTVDRYGKLVIERDDEGLIIRSTDETVIRQIAT
NKKVAPMLEAPIEGGYRVQDWARGSLKQQLVKLGWPAEDLAGYTPGTPHEIDLTEDGWSL
RDYQKDAVSNFFEGGSGVVVLPCGAGKTIVGAGAMAAADTNTLILVTNTVSARQWRAELL
RRTTLTEDEIGEYSGESKEIKPVTIATYQILTARRKGEYAHLSLLNALDWGLIVYDEVHL
LPAPVFKLTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGFISPAE
CFEIRVDLPYETRMEYASAADEDRYRIAATAEVKLDVMKEIVEKHRDERILIIGQYLDQI
DEVAETLGVPKLTGQTPNKEREELYEAFRNGDAPILVVSKVANFSVDLPDASVAIQISGS
YGSRQEEAQRLGRLLRPSSTGVSASFYTIVARETVDQDFAQNRQRFLAEQGYAYSILDAE
SLTAVA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctcttggacccctcattgtgcaaagtgaccgaaccgtgctgctcgaagtcgcacat
ccggacgccaatgatgcccgacacgagcttgccgtgtttgccgaactcgagcgcgcgccc
gagcacgtccacacctatcgcatcacgcgattgggcctctggaacgcccgagccgcaggc
cacaccgccgacgagatgctcgaaacgctcaacaaatacgcgaagttcccggtgcccgaa
tcggtcgcctacgacctgcgcgacaccgtcgaccgctacggcaagctcgtgatcgaacgc
gatgacgagggcctcattattcgctcgaccgacgagaccgtgatccgtcagatcgcgacc
aataagaaggtcgcgccgatgctcgaggcgcccatcgagggcggctatcgcgtgcaggac
tgggcgcgcggttcgctcaagcagcaactcgtcaagctcggctggcccgcggaggatctc
gcgggctacacccccggcaccccgcacgagatcgacctcaccgaggacggctggtcgctg
cgcgattaccaaaaggatgcggtcagtaacttcttcgagggtggctccggcgtcgtggtc
ctcccctgtggcgcgggcaagacgatcgtcggtgcaggcgccatggctgcggccgatacc
aacacgctcatcctcgtgaccaacaccgtctcggcacgccagtggcgcgccgagctgctg
cgccgcacgaccctgaccgaggatgagatcggcgaatactcgggcgaatcgaaagagatc
aagcccgtcacgatcgcgacctatcaaatcctcaccgcgcgacggaagggcgaatacgcg
cacctctcgctgctgaacgccctcgactggggactcatcgtctacgacgaggtgcacctg
ctgcccgcgccagtgttcaagctgacggccgacctgcaggcgcgccgacgactcggcctc
accgcgacgctcgtgcgcgaggatggccgcgagagcgacgtgttctcgctcatcggcccg
aagcgcttcgacgcgccctggaaggagatcgaggctcagggcttcatatcccccgccgag
tgtttcgagattcgcgtcgacctgccctacgagacgcgcatggaatacgcctccgcggcg
gacgaggatcgctaccgcatcgcggcaaccgccgaggtcaagctggatgtcatgaaggag
atcgtcgaaaagcaccgcgacgagcgcatcctcatcatcggccagtatctcgaccagatc
gacgaggtcgccgagaccctcggcgtgccgaagctcaccggtcagacaccgaacaaggag
cgcgaggaactctacgaggcgttccgaaacggcgatgccccgattctcgtggtctcaaag
gtcgcgaacttctcggtcgatctcccggatgcgtcggtcgcgatccagatttccggctca
tacggttctcgccaggaagaggcgcagcgcctcggccgcctgctgcgcccgtcgtcgaca
ggggtctccgcatccttctacacgatcgtcgcgcgcgagaccgtggatcaggacttcgcg
cagaatcgccagcgctttctcgccgagcaggggtacgcgtactcgatcctcgacgcggaa
tcgctcacggcggttgcgtag
DBGET
integrated database retrieval system
