Gemella morbillorum: NCTC11323_00348
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Entry
NCTC11323_00348 CDS
T05494
Name
(GenBank) Probable DEAD-box ATP-dependent RNA helicase SA1885
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11323_00348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmo03019
]
NCTC11323_00348
03009 Ribosome biogenesis [BR:
gmo03009
]
NCTC11323_00348
Enzymes [BR:
gmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11323_00348
Messenger RNA biogenesis [BR:
gmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11323_00348
Ribosome biogenesis [BR:
gmo03009
]
Prokaryotic type
rRNA helicases
NCTC11323_00348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SQH54906
LinkDB
All DBs
Position
1:362689..364146
Genome browser
AA seq
485 aa
AA seq
DB search
MTTFEELGVSSKIVESLTNMNFVSPTGIQTETIPYVLSGIDILAQAQTGSGKTGAFGIPI
VDTVRKTEELQSLILAPTRELAQQVGEQLRLMSRVKGLKVSIIFGGTSIERQIQDLKKRP
QIIVGTPGRVIDHINRKTIRLETLTHLVLDEADEMLNMGFIEDVRFILSKITSRHQTLLF
SATMPKTIMELSKDFMKDYKLVKTMSDEDLNPDITEFATIARENEKLETLIGFLDVQNPN
LAIVFGRTKRRVDELSSALIAKGYLAEGLHGDITQSKRLEILRKFKNNSLQILVATDVAA
RGIDISDVTHVYNFDIPQDTESYTHRIGRTGRAGKSGVAVTFLNPIEMPYLKDIEASRGE
RMKMLRPYTSEEVKKARYNRMFEEVVSELDNNHVEFNSLANKLMAEANAEKIITVLLSKL
INDKKEVDVELSFEKPLPRKQEKSRRSGRSNDRKRRDSRDRKPRNERRSTDKKFFDKKGR
RMQNK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttgaagaattaggagttagcagcaagatagtagaatcgctaactaacatg
aactttgtatctcctactggtatccaaacagaaacaattccatatgtactatcaggaatt
gatatattagcccaagcccaaacaggttcaggaaaaacaggagcatttgggataccaata
gtagatacagtaagaaaaacagaggaactacaatcattgattttggcaccaacgagagaa
ttagctcaacaggtaggagagcaacttcgtttaatgtcacgtgtcaaaggacttaaggtt
agtataatctttggtgggacaagtattgaaagacaaatacaagatttgaaaaaacgtcct
caaataatagtaggaactcctggtagagtaatagaccatattaatagaaaaactataaga
ttagaaacattaactcatttagtattagatgaagcagacgaaatgctaaatatgggattc
atcgaagatgttagatttattttatcaaaaataacatctcgtcatcaaacactactgttc
tcagcaacaatgccgaaaactattatggaactttcaaaagactttatgaaagattataaa
ctagttaaaacgatgagtgatgaggatcttaatccggatatcactgagtttgcaacaata
gcaagagagaatgaaaaattagaaacattaataggatttttagatgtgcaaaatcctaat
ttggcgatagtttttgggcgtactaagcgtcgtgttgatgagttatctagtgcattaatc
gcaaaaggatatttggctgagggcttacatggagatataacgcagtcaaaacgtttagaa
attcttcgtaagtttaaaaataactcattgcaaatattagttgcgactgatgttgcagct
aggggaatagacattagtgatgtgactcacgtttataattttgatatccctcaagataca
gagagttatacacatagaattggtcgtacaggacgtgcggggaaatcaggagtagctgtg
acattcttaaatccaatagaaatgccatatttaaaagatatagaagcttctcgtggcgaa
agaatgaaaatgttgcgaccttatactagtgaagaagtaaaaaaagcgcgctacaacaga
atgtttgaagaagtagtttcagaactagataataatcatgtggaatttaatagtttagca
aataaattaatggcagaagctaatgctgaaaaaattattacggtgcttttaagcaaattg
attaatgataaaaaagaagtagatgtcgaattatcatttgaaaaacctcttcctcgcaaa
caagaaaaatctcgtagaagtgggcgctcaaatgacagaaaaagaagagatagtcgcgat
agaaaacctcgtaacgaacgtcgtagtacagataaaaaattcttcgacaaaaaaggtaga
agaatgcagaacaagtaa
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