Gemella morbillorum: NCTC11323_00452
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Entry
NCTC11323_00452 CDS
T05494
Name
(GenBank) Ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gmo
Gemella morbillorum
Pathway
gmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11323_00452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmo03019
]
NCTC11323_00452
Messenger RNA biogenesis [BR:
gmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC11323_00452
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
SQH55007
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All DBs
Position
1:464950..466788
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AA seq
612 aa
AA seq
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MSNNNISIAKNVQVSKNSNNKQKTHQKRNNKPINKKNIKIEKNQSSIQKEVSLKENKVKK
LIPKICITPLGGVDEVAKNMYMIEIADEIFVLDAGLMFPETEMIGIDAVIPDISYLVRNK
QKVKGIFLSNGHVSSMGAVPYIIDKLKCPVYGSKLTIDLLKNHLKHLGIKRRIKFYYVKE
NNKYDFNSASITFFKTTYSMPDSLGICIETSQGNIVYTGEFKFDQSVSKEYKSDIVKIST
LGKKGVLALLSDSSNANMKGYNVPENEAAEQIDNAFYQANKRIIVTCYASNFLTISHIVR
AALGQNRKLLLLGEAIEDSINTARNMNYLAIEDENLITVDELGNYPQNEICILSSGDQGE
PIEAMKNIAEKNIKGIQIESGDTIMIAATPSPNMEVMLFQTLNLLVKLGAHVVTASKRLH
AASHATREELKMMLNMLMPKFFVPVQGEFRNLRKHAEIAAETGVAANNIHILAKGTTLEI
SGNRAKVIPNNVTVGNILVDGRGIGDVEDSVLKDRKLLSNDGIFVASYAISRKEKILVGR
PCIQTKGFVYVKKSMELIKEAEEKIIEYIENNPIKSIRECAAIKAEVRSMLSSLLYDNTK
RKPIIIVNFTLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataataatattagtattgcaaagaatgtccaagtaagtaaaaacagcaataat
aagcaaaaaactcaccaaaagagaaataataaacccataaataaaaagaatataaaaata
gaaaaaaatcaaagtagcatacaaaaggaagtaagtttaaaagaaaacaaagttaaaaaa
ctaattcctaaaatttgcattacacctctaggaggagtggatgaagtagctaaaaatatg
tatatgatagaaatagctgatgaaatctttgtgcttgatgcaggtcttatgttccctgaa
acagagatgatagggattgatgcagtaattccagatattagttatttagttcgtaataaa
caaaaagtaaaagggatattcctatcaaatgggcacgtaagttctatgggggctgtacca
tatataatagataaacttaaatgtccagtttatgggtctaaattaactattgatttatta
aaaaatcatttaaaacatttaggaattaaacgtcgtattaagttttactatgtaaaagaa
aataataaatatgattttaatagtgcgagtattacttttttcaaaacaacatactctatg
cctgattcacttggtatttgtatagaaacatcacaaggtaatattgtttatactggggaa
tttaagtttgaccaatctgtaagtaaagaatataaatctgatattgtaaaaattagtaca
ttagggaaaaaaggtgtattagctttacttagtgactctagcaacgctaatatgaaagga
tataatgtacctgaaaatgaagcagctgagcaaattgataatgcattttatcaagcgaat
aaacgcataatcgtaacttgttacgcttcaaatttcttaacaatttcacatatagttcgt
gcggcattaggacaaaacagaaaacttctattactaggagaagcgatagaagactctatt
aatactgcgagaaatatgaattacttggcaatagaagatgaaaacttaattacagtagat
gagcttggtaattatccacaaaatgaaatttgtattctatcttcaggtgatcaaggagaa
ccaatcgaggctatgaagaacattgctgagaagaatattaaaggtattcaaatagaatca
ggggacactattatgattgcagcgacaccatcgcctaacatggaagtaatgttgttccaa
acattgaatcttcttgttaaacttggtgcacatgtagtaacagcatcaaaacgtcttcac
gctgcgagccatgctactcgcgaagaattgaagatgatgttaaatatgcttatgccgaag
ttctttgttccagttcaaggagaattcagaaatctacgtaaacatgctgaaattgcagca
gaaacaggagtagcggctaacaatattcatattctagcaaaaggtactacactagaaatt
agtggaaatagagcaaaagtaatacctaataacgttacagtaggtaatatattagtagat
ggtcgtggaattggcgatgttgaagatagtgttcttaaagatagaaaactgttatcaaat
gatgggatttttgtagcctcatatgctataagtaggaaagaaaaaattctggtgggtcgt
ccatgcattcaaacaaaaggttttgtatatgttaagaagagtatggagcttataaaagaa
gctgaagagaaaataatagagtatatagagaataatcctattaagagtatcagagagtgt
gcagctataaaagctgaagttagaagtatgttatcaagtttattatatgataatacgaag
agaaaacctattataattgttaattttacactgatttaa
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