Gemella morbillorum: NCTC11323_00553
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Entry
NCTC11323_00553 CDS
T05494
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gmo
Gemella morbillorum
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_00553 (sbcC)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11323_00553 (sbcC)
Archaeal homologous recombinant proteins
NCTC11323_00553 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
T2SSE
Nup54
AAA_22
FtsK_SpoIIIE
ABC_tran
NPHP3_N
AAA_16
NikR_C
Motif
Other DBs
NCBI-ProteinID:
SQH55098
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All DBs
Position
1:548856..551885
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AA seq
1009 aa
AA seq
DB search
MKPIRLELREFGPYKHEVIQWNEIVNEPMFLITGKTGSGKSTLFDAFVYALYNKTTSGKD
IASLRTKTADDKDRTIVIFDFELQGKHYRIERTLAYLKTGNKNITSGKVSLMEINAGVET
ILATKENDVKEKVEQIIGLDDKQFCQIIILPQGKFKEFLLSNSNEKKEVLRSLFNTHFYQ
KFVDKLQNYAKTLDSNYKLKERELVTKFEQFNFEKDFPKIEFLKESDFEEVEKQLVFQKN
EVNELEKHQKYLEDELTKLKIEYSELDKLNDKFSNLEENNDSHKKLLEDAQRITHLKNIV
KKLEELGKNKDKLLDYDNYLDKKEQLIKNKETLSKEQNILGEKIQENKKLGEEILTQNYS
INDIREEIARYNYFYENIEFFYQAEKDIALYSEKLKNIEDTKGAIEQLEKEVTDYNVNLE
EYKEELNILENSIGKLKLDILKKETEVEKLEDFRNLENTIKSKAADLKEKQTELSLANSR
QKELEQKILELEKNKQQEILNTFLVHLHEGDCCPLCQQKIKKLPDVKQVIKTENEDAKNE
LDDIIKNIIRLETLVVKEKEDLSILQEELASKKIEINFSAKEELEQFVVEKKNEDNERKI
TFEKIEKVSNCRNELAEKLEKLNSLISFESEYKEKLGIAQAKKQQYMANIDISLDEFEQY
YEKQKQIVLSYDEKQELYQKVKTNLMLKEKELAIELKNNNKNILEVEKTIENIIEKFKDS
KLKLYYNSLKIAKDDLEKLDDIESYKNEIQVYEDRLKIILDNIQRLEEELHNKERPNLED
YAQELSTKEQKMMDCAEKVAILKTKFKTNTNLLEKLSKEFTILEKNISTAREVFALSNVI
SGKTESKKSLETYVQGYYLDLILEAGTKRLLQMTDERYRFERKIERAKGGGLQGLDIEIY
DVYLNSSRMVSSLSGGEIFLASLSLALGLAEVIQNESGGISLETIFIDEGFGSLDAETLD
TAITTLIELQSYGRNIGIISHVSELKERIRPKLEVYSKNNYAKVKISGV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaggcttgaacttagagagtttggaccgtataagcacgaggtcatacaa
tggaatgaaatagtaaacgagcctatgtttttaataacaggtaagacaggctctggtaaa
tctactttatttgatgcttttgtctatgcattatataataaaacaactagtggtaaagat
atagcatctcttagaaccaaaacagcagatgataaagacagaacaattgtgatttttgat
tttgaattacaaggaaaacattatcgaatagaaagaacgttagcatatttaaagacagga
aacaaaaatattacatcaggaaaagtatctttaatggaaataaatgcgggtgtagagact
attcttgcaacaaaggaaaatgatgtaaaagaaaaagtagagcaaattattggattagat
gataaacaattttgtcaaattataattttgccacaaggtaagtttaaagagtttttatta
tcaaattctaacgaaaaaaaagaagttttacgttcgttatttaatacacatttttatcaa
aaatttgtggataagttgcaaaattatgctaaaactttagatagcaactataagttaaaa
gaacgtgagttagttacaaaatttgagcagtttaattttgaaaaagattttccaaaaatc
gaatttttaaaagaaagtgattttgaggaagtagaaaaacagctagtttttcaaaagaat
gaagttaatgaattagaaaaacatcaaaaatatttagaagatgagctaacaaaattgaaa
attgaatatagtgagttagataagttaaatgataagtttagtaatttagaagaaaataac
gattcacataaaaaattattagaagatgcacaaaggataactcatttaaaaaatattgtt
aaaaagttagaggaactgggaaaaaataaagataaattactagactatgataactactta
gataagaaagagcaattgattaaaaataaagaaaccttatctaaagaacaaaatatatta
ggtgaaaaaattcaagaaaataaaaaattaggcgaagaaatattaactcaaaattatagt
atcaacgatattcgagaagagatagctcgttacaactatttttatgaaaatatagaattt
ttctatcaagcagaaaaagatatcgcattgtatagtgaaaagttaaagaatatagaagat
acaaaaggcgcaatagaacaattagaaaaagaagtaactgactataatgtaaatttagaa
gaatataaagaagagcttaatattttagaaaatagcataggcaaattaaaacttgatatt
ttgaaaaaagagacagaagtagaaaaattagaagattttcgaaatttagagaatactata
aaaagtaaagctgcagatttgaaagaaaagcaaactgaactaagtctagccaatagtaga
caaaaagaactagaacaaaaaattctagaattagaaaaaaataaacagcaagaaatatta
aatacttttttagttcatctacatgaaggtgattgttgtccgctttgtcaacaaaagatt
aaaaaacttccagatgtaaaacaagtaataaaaacagaaaatgaagatgctaaaaatgaa
ttagatgatattattaaaaacataattcgtttagaaacacttgtcgtaaaagaaaaagaa
gatttaagtatcctacaagaggagttagcaagtaaaaaaatagaaattaatttttccgca
aaagaggaacttgaacaatttgtagtggagaaaaagaatgaagataatgagagaaaaatt
acttttgaaaaaatagaaaaggtctcaaattgcagaaatgaacttgctgaaaagttagaa
aaattgaactcgctaatatcatttgaatcagagtataaagaaaaacttgggatagctcaa
gctaaaaaacaacaatatatggcaaatattgatatttctttagacgagtttgaacaatat
tatgagaaacaaaaacaaatagtattaagttatgatgaaaagcaagaactttatcaaaag
gtaaaaactaacttgatgttaaaagaaaaagaattggcaatagagttaaaaaataataat
aaaaatatattagaagttgaaaaaactatagaaaatataatagaaaaattcaaagactct
aaattaaaattatactataatagtttgaaaatagctaaagatgatttggaaaaattagat
gatattgagagctataaaaatgaaattcaagtttatgaagatagactaaaaataatttta
gataatattcagcgtttagaagaagaattacataataaagaacgaccaaatttagaagat
tatgcacaagaattatcgacaaaagaacaaaaaatgatggattgtgctgaaaaagttgct
attttaaagactaagtttaaaactaatactaatcttttagaaaaactatcaaaagaattc
acaattttagaaaaaaacataagtacagcacgtgaagttttcgccttaagtaatgtaatt
agtgggaaaacagaaagtaaaaagtcgctggaaacatatgttcaaggttattacttagat
cttatattagaagcaggaactaagagattattacagatgacagatgaacgatatagattt
gaaagaaagatagaaagagctaaaggtggcggacttcagggcttagacatagaaatctat
gatgtttatttaaatagttcacgtatggtaagctcactttcgggtggtgaaatattcctt
gcatcactatcattagcactaggattagcagaagttattcaaaatgaaagtggtgggatt
tctcttgaaaccatatttattgatgaaggatttggttctcttgacgcagaaaccttagat
actgcgataacaacattgatagagttacaatcttatggtagaaatataggtataatttca
catgttagtgaattaaaagaaagaataagaccgaaattagaagtctactcaaaaaataac
tatgctaaagtaaagatttctggagtatag
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