Gemella morbillorum: NCTC11323_00554
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Entry
NCTC11323_00554 CDS
T05494
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gmo
Gemella morbillorum
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_00554 (addB)
Enzymes [BR:
gmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11323_00554 (addB)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC11323_00554 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
SQH55099
LinkDB
All DBs
Position
1:551942..555793
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AA seq
1283 aa
AA seq
DB search
MSLELLIAPSGFGKTHFMLEDIEKNRHENKIIILTPEQNSFNFETILCEKFRGTFNIDVM
NFSSLTKKLGQLLGLDDLKKLGEDIKPFYFYKAAQNLKNSDNFLVKRILNDSNFIEVVEE
IITELKDYQISVNSLEEYLEKNSNLEQVRREKLEAILEFYVEYTKLLKATSTYDKQDYIN
ELLLYSQYVDLSDYIFYIDAYYNFTAQEYNYIEKLILKSQKVVLSVIADANRYFNVDLAQ
LVAGYELDKIKYKPFYLVDVYKDDKYKLDIFRKSHEMMASINEILRRNKDVELDIIAFTE
NKEQVVPIKMQVQEALVTTYELYQKHKTRFEGKANRVLATKYYKNFKDKFELDDSIKLIC
AKNKELEVKEVARQILKLRLEKGIENTDIAILYRDNTYENYMTIFRDYNLDVYLDKNLNV
SNHRLIKFLDLVLNFENLDFKAGLLNILKTRLTDFENIYRRKVVSYLLTGNNVNLTTKEI
KETFSQTSNGQLEEVISLSPKLVNIGNNKITLKALFAGVKVVSIDKLENILNTNLIYSKK
SLEKAELISKSADIDSFIFELCRGILLELLEKIETVSKFKNTQTKRYIKKIEELFNYCNI
QMYLDKEDGEYESIEELKIDSIDRQVYKKTLELLNDIMDKFGDEKIEYEKFVELAIMGLK
TINYRSIPEINEAIIMSSMDLAKVENKKVVFVIGFNKDVLPVSKKHGLLDDKDKEDFFEK
NLFISPTTEAALIDEEFVAYTALTRAREKTYISYSLLDKSFKENFSSPYLSVVKNLFPNL
EEIGVSKMLEFNLSFYDYYKENIDKLLTQKEYNYIFSKAYRRFMEVKDNATKETEKLAEL
LMVFLEGYKFDNEKNDNQMYEVRGELSDRVYFDKNTLVKNYLDKIIRDYRFELSNKSIKK
FLQERESYFSKFSISKIADYEKNPYLFFIKRVLDIKEEQTIDIDNLVIGRFFHAVMADER
TIRFIKASGEKLLVSEEYDNDIVNKFEVRKLIHKVVFDNSNKDIVETLRLIELLSTHNYI
LQTMLRRIELAIAVEIKYCSLTKYSPTFLEKPFELTINKEKITCKELESGKVIEKQLGST
YNIPNIKFVGFIDRVDTLGKNIVVIDYKSSQTDFSLESLELGFISQILTYSLACELLFNK
KTEDILGIFYREIARIGKDINAYRLRGLGNKDLILGSDFVDNNADVMYIRTTKKGGIHGA
DDYKAYTSKELDILVEKNLHNILKLLEEIYSFNYSLTNYEVNGQYEAEKDTLFNYSANID
TRLEYKKKITLKGKDLKAKILSE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagaattattaatagctccaagtggttttgggaaaacgcactttatgctagaa
gatattgaaaaaaatagacatgaaaataagataataattcttaccccggaacaaaacagt
tttaactttgaaacaatactttgtgaaaagtttagaggaaccttcaatatagatgtcatg
aatttttcaagtttgacgaaaaagctaggtcaacttttaggtttagatgacttgaaaaag
ttgggggaagatataaaaccattttacttttacaaagcagcacaaaatttgaaaaatagt
gataattttctagtaaaacgtattttaaatgacagtaattttatagaagtagttgaggag
attattacagaattaaaggattatcagatcagtgttaatagtctagaagagtatttagaa
aaaaattctaacttagaacaagtgcgtcgtgaaaaattagaggcaatattagagttttat
gtagagtatacaaaattattaaaagctacttcaacatatgataagcaagattatattaat
gaacttttactttattcgcaatatgtagaccttagtgattatatattttatatagatgca
tattataattttacagctcaagaatataattacatagaaaaattgattttaaaatcccaa
aaagtagttcttagtgttattgctgatgctaataggtatttcaatgtagatttagctcag
ttagttgctggttacgaattagataaaataaaatataaaccattttatttagttgatgtc
tataaagatgataagtataaacttgatattttcagaaaatctcatgaaatgatggccagt
ataaatgaaatattacgccgtaataaagatgtggaattagatattatagcatttactgaa
aataaagagcaagtagttccaataaaaatgcaagtacaagaagcattagtaacaacatat
gaactataccaaaagcataaaactcgttttgaaggtaaagctaatagagtattagcaact
aaatactataagaattttaaagacaagtttgagctagatgatagtattaagcttatttgt
gcaaaaaacaaagagttagaagtaaaagaagttgcacgtcaaattttgaaactgagatta
gaaaaaggcatagaaaatacagatatagcaattctctatcgagataatacatatgaaaat
tacatgactatttttagagattataatttagatgtgtaccttgataaaaacttaaatgta
agtaatcatagattaataaaatttttagatttagtattgaattttgaaaacttagacttt
aaagcgggacttttaaatattttaaaaactagattgacagattttgaaaatatttatcgt
agaaaagtggtaagttatcttctaacaggaaataatgtaaatctaacaactaaagaaatt
aaggaaactttttctcaaacatctaatgggcaattagaagaagtaatatcactatcaccc
aaattagtaaatattggaaataacaaaattactttaaaagcattgtttgctggagttaag
gtggtttctattgataaactagaaaatatattaaatacaaatttaatatatagcaaaaaa
agtttggaaaaggcagagcttatttccaagagtgctgatattgatagttttatttttgaa
ctttgcagaggtattttattggaattactagaaaaaatagaaacggtctctaagttcaaa
aatactcaaactaagcgttatattaaaaaaatagaagaattatttaattattgtaatatt
caaatgtatttagataaagaagatggtgaatatgagagtatagaggaattgaagatagac
agtattgaccgtcaagtctataaaaaaactttagaattgctaaatgatatcatggacaaa
tttggtgatgaaaaaattgagtatgaaaaatttgtagaattggcaattatgggactaaaa
actataaactacagatcaattccagaaattaacgaagcaataataatgtcatctatggat
ttggcaaaagttgagaataaaaaggtagtgtttgttataggatttaacaaagatgtacta
ccagtatcaaaaaaacatggactattagatgataaagataaagaagatttctttgagaag
aacttattcatatcacctacaactgaagcggctcttatagacgaagagtttgttgcttac
acagctttaactagggcaagagaaaaaacatatattagttatagtttattagataaaagt
tttaaagaaaacttttcctctccatatttaagtgtagtaaaaaatttgtttccaaattta
gaagaaataggtgtttcaaaaatgttggagttcaatttatctttctacgattattacaag
gaaaatatagataaattactaacacaaaaagaatataattatatattttcaaaagcttat
cgtcgttttatggaagtaaaagataatgctacaaaagaaacagaaaaattggcagagttg
ctgatggtatttttagaaggatataagtttgataacgaaaaaaatgataatcaaatgtat
gaagttcgtggtgaattaagcgatagagtatattttgataaaaatactctggtgaaaaac
tatttggataaaattatacgcgattatagatttgaattatcaaataaaagtattaaaaaa
tttcttcaagaaagagaaagttacttttctaaatttagtatttcaaaaatagcagattat
gaaaaaaatccatatttattctttataaaaagggtactagatataaaagaagaacaaact
attgatattgataaccttgttataggaagatttttccatgctgttatggcagacgagcgt
acaattagatttatcaaagctagcggagaaaaattattggtttctgaggaatatgataat
gacattgttaataagtttgaagtaagaaagttaatccacaaagttgtttttgataatagc
aacaaagatatagttgaaacattgaggttaatagaattattaagtacgcacaactacata
cttcaaacgatgttacgccgaatagaattagcaattgctgtggaaataaagtattgctca
ttaacaaaatatagtccaacgtttttagaaaaaccatttgaacttacaataaataaggag
aaaatcacttgtaaagaattagaaagtggtaaggtaatagaaaaacaattaggttccact
tacaacatacctaatattaaatttgtagggtttattgatagagtagatacacttgggaaa
aatatagttgtaatagattataagagtagccaaactgatttttcattagaatctcttgaa
ttagggtttatatcacaaatactaacttactctttagcttgcgaactgctctttaataaa
aaaacagaagatatccttggtattttttatagagagatagcgcgtattggaaaagatatt
aatgcgtatcgtttacgtggtttggggaataaagatttaatacttggaagtgactttgta
gataacaatgccgatgttatgtatatacgaacaactaaaaaaggtggaattcatggagcg
gatgattacaaagcatatacgagtaaggaattagatatattggtagaaaaaaatcttcat
aatatcttaaaactattagaagaaatatattcttttaattattctttaacaaactacgaa
gtaaatggacaatatgaggctgaaaaagatacattatttaattattctgctaatattgac
acaaggttagaatataagaaaaaaataaccttaaaaggaaaagatttaaaggctaagata
ttgagtgaatag
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