Gemella morbillorum: NCTC11323_00615
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Entry
NCTC11323_00615 CDS
T05494
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gmo
Gemella morbillorum
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmo03019
]
NCTC11323_00615 (cshB)
03009 Ribosome biogenesis [BR:
gmo03009
]
NCTC11323_00615 (cshB)
Enzymes [BR:
gmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11323_00615 (cshB)
Messenger RNA biogenesis [BR:
gmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11323_00615 (cshB)
Ribosome biogenesis [BR:
gmo03009
]
Prokaryotic type
rRNA helicases
NCTC11323_00615 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Flavi_DEAD
Microtub_bd
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SQH55158
LinkDB
All DBs
Position
1:621290..622621
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AA seq
443 aa
AA seq
DB search
MLSKSFEQYKFNEFVNKAIVDLKFDNPTKIQERVFSPVLKGKNIVAKSQTGSGKSHSFLL
PIFSKLNVEKKKTQSIILAPTRELSRQLYDMAVHIAEFSEDDIKITLCIGGQDLNRDIER
VSNAPHIIIGTPTRVLELDRASALAIKEVETLVIDECDMMIDLGFMEDIDKISKRTAENC
QFLVFSATIPTQMNHFLKKYLKNAQYIEVDNAKFGKIEYILIPEKSSTRLEKLYEITTVI
NPYLALIFANKKTEVEEVSNYLISKGLNVGVLHGDLTPRERKQMQRRINNLDFTYVVASD
LMSRGIDIEGVSHVINYNIPNDLDFFIHRAGRTGRAGLNGDCITIYNNKDEEKLQILESR
GIEFNHQDIKNGEFIETKDRNKRQSRKKVVADHNLTEKLKSKVRVSKKVKPGYKKKYKYK
MDKLKQKERRKFAKRSNKANRGK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaaagtcatttgaacaatataaatttaatgaatttgtaaataaagcaatagta
gatttaaaatttgataatcctacaaaaattcaagaaagagtattctcacctgtattaaaa
ggtaaaaatattgtggcaaaatcgcaaacaggaagtgggaaaagtcactctttcctatta
ccaatttttagtaagctaaatgtagaaaagaaaaagactcaaagtataattttggcgcca
acacgagaattatctcgtcaactttatgatatggcagtccatattgcagagtttagtgaa
gatgatataaaaattacgctatgcattggtggtcaagatttgaatcgagatatagaaaga
gtatcaaatgcaccacacattataatcggaacgcctactcgtgttttagaattagatcgt
gcaagtgctcttgctattaaagaagtagagactttagttatcgatgaatgtgatatgatg
attgatttaggttttatggaagatattgataaaatttctaaacgtactgcagaaaactgt
caattcttagtattttcagcaactattcctactcaaatgaatcatttcttaaaaaaatat
ttgaaaaatgctcaatatatcgaagttgataatgcgaaatttggaaaaattgaatacatt
ctaattccagaaaaaagttcaacgcgtttagaaaaactatatgaaattacaacagttatt
aatccttatttagcacttatttttgcgaataaaaaaacagaagttgaggaagtaagtaat
tatttaatttcaaaaggactaaatgttggagttcttcacggagatttaacaccacgtgaa
cgaaaacaaatgcaacgtcgtattaataatttagattttacttatgtagttgctagtgat
ttaatgagtcgaggaatcgatattgaaggtgttagccatgtaattaactataatattcct
aatgatttagacttctttattcatagagctggacgtacagggcgtgctggtttaaatggc
gattgtattacaatctacaataataaagatgaagaaaaattacaaattcttgaaagccga
ggaatagaatttaatcaccaagatataaaaaatggtgagtttattgaaactaaagataga
aataaacgtcaaagtagaaaaaaagttgttgctgatcataatttaacggaaaaattaaaa
tcaaaagtgcgtgtttctaaaaaagttaaaccaggttataagaaaaaatataaatataaa
atggataaacttaaacaaaaagaaagaagaaaattcgctaaaagaagtaataaagcaaat
agaggtaaataa
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