Gemella morbillorum: NCTC11323_00858
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Entry
NCTC11323_00858 CDS
T05494
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC11323_00858 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_00858 (recD)
Enzymes [BR:
gmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC11323_00858 (recD)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11323_00858 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
OB_YrrC
Viral_helicase1
AAA_11
UvrA_inter
AAA_12
HHH_5
nSTAND3
AAA
AAA_22
SLFN-g3_helicase
DEAD
AAA_29
NPHP3_N
PhoH
AAA_28
UvrD-helicase
NAT10_TcmA_helicase
CdiA_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
SQH55393
LinkDB
All DBs
Position
1:complement(849036..851360)
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AA seq
774 aa
AA seq
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MKNVEGYLSKIIFHNKENNYYILSIFLNDNYDFVDGDYLSVVGTFDDIDFIEDDLYSFKG
QIVQHRKYGTQLSAIVAEPVIEKDKDAIVSYLSSSIFQGIGRKTAELIVDSLGVEALDKI
YDDKTTLYDIKGIPTSRKDIIYNTIIANKQTQDIILKLNEYNLSNNLILKIYNFYKHNTL
RTITENPYSLIKDIKGINFKTVDKIAEINNIEANDRERILYGFIYTVNTFCFSTGNTYIM
KNALLYNTFNVLYSSRNIAVDKEDILNALTYCLDTGKLVELEEKIFLPEIYYSEYAIYND
IERRLDKQNSVDISDELLDKYIGEIEEELGIEYDIVQIAAIKNSIINNFSILTGGPGTGK
TTIILAIIKVFQKLNNYSLSDLQDETKSILTLCAPTGKAAKRMAESTGLYASTIHKAIGW
TVEDEDMEEFVSEKRIKSELIIIDETSMIDVFLMYNLLKIIHPDAKILLVGDNDQLPSIA
PGNVLNDLINAQVIPTVKLNKVFRQSEHSSIINISHSIRNNIPFDILENFDDKEFLLATK
NEVLDVITTTYDSILKESKKEKIQILAPIYKGGAGINEINKTIQTLFNQNELQVEYGDLI
YKVDDRVMQLVNRPEDNIFNGDIGYVYDIFKEAGKIKIVIDYDDNFVTYEKQELNQITLS
YACSIHKAQGSEFENVIIPFIDSYNFMLNKNLTYTAITRAKKKLILCGNPNVFYKSIEPT
NTVIRQTALSTFFTNEKTKKINIELNEDYILTYKNLNTIDPMIGMNDIKPEDFI
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtagaaggttatctaagtaagattatttttcataacaaagaaaataattat
tatattttatcaatttttttaaatgataattatgatttcgtagatggtgactatcttagt
gtcgtaggaactttcgatgatattgattttattgaagatgatttatattcatttaaaggt
cagatagttcaacatagaaaatatggaacacaactttcagcgattgttgcggaacctgta
attgaaaaagataaagatgcgattgtttcttatttatctagttccatttttcaaggtatc
ggaagaaaaaccgcagaattaatagtcgatagtttaggtgtagaagcattagataaaatt
tatgatgataaaactacactatacgatattaaaggtattccaacttcaagaaaagatatt
atctataacacaataatagccaacaaacaaactcaagatatcattttgaaattaaacgaa
tataatcttagtaataatcttattttaaaaatctataacttttacaaacataatacacta
cgcacaataacagaaaatccatattctcttattaaagatataaaaggtattaattttaaa
actgttgacaaaatagctgaaattaataatatagaagctaacgatcgtgaaagaatatta
tatggttttatttatacggtaaatacattttgtttttctactggaaatacatatataatg
aaaaacgcattactttataatacatttaatgttctatattcatcacgtaatatagcagta
gataaagaagatatattaaacgctcttacctattgtttagatacaggaaaactagtagaa
ctagaagaaaaaatctttcttccagaaatttactattcagaatatgcaatatacaatgat
atagaacgccgacttgacaaacaaaattctgtagacattagtgatgaacttttagataag
tatattggcgaaattgaagaagaacttggaatcgaatatgacatcgtacaaatagctgct
attaaaaactctataattaataacttttctatattaactggagggcctggaacgggaaaa
acaacaattattcttgcaataataaaggtatttcaaaaacttaacaattatagcctttca
gaccttcaagatgaaaccaaaagtatattgacactatgtgctccgactggtaaagctgca
aaacgtatggcagaaagcacaggtctttacgcttcaacaatacataaggctataggttgg
acggtagaagatgaggatatggaagagtttgttagtgaaaaaaggataaaatcagaatta
atcataattgatgaaactagtatgattgatgtatttttaatgtataatttacttaaaata
attcaccctgatgcaaaaattcttttagttggagacaacgatcaattaccatcaattgct
ccaggaaatgtccttaacgatttaattaacgctcaagtaattccaactgttaaattaaat
aaagtttttagacaaagtgagcattcaagcataataaatatttcccactctattagaaat
aatattccttttgatatacttgaaaattttgatgataaagaatttctattagcaactaaa
aatgaagtactggatgtcattactaccacatatgatagtatattaaaagaatcaaaaaag
gaaaaaattcaaatattagcacctatttataaaggaggcgctggtatcaatgaaatcaat
aaaacaattcaaactctctttaaccaaaatgaacttcaagttgaatatggagatttaata
tataaggtggatgatagagttatgcagcttgtaaatcgtccagaagacaatattttcaac
ggggatataggttatgtttatgatatttttaaagaggctggaaaaataaaaatagttatt
gattatgatgataactttgtaacatatgaaaaacaagaacttaatcaaataaccctatca
tatgcttgttcgattcataaagcccaaggttcggaatttgagaatgtaattataccgttt
attgatagttataactttatgttaaataaaaatctaacgtataccgctataactcgtgct
aagaaaaaattaattttatgtgggaatccaaatgtgttttataaatcaatagaacctact
aatacagtaataaggcaaacagcattatctactttctttactaatgagaaaacaaaaaaa
ataaatatagaactaaatgaagactatattttaacgtataaaaaccttaataccattgac
cctatgataggaatgaatgacataaaacctgaagattttatttaa
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