Gemella morbillorum: NCTC11323_00898
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Entry
NCTC11323_00898 CDS
T05494
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gmo
Gemella morbillorum
Pathway
gmo03410
Base excision repair
gmo03430
Mismatch repair
gmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11323_00898 (recJ)
03430 Mismatch repair
NCTC11323_00898 (recJ)
03440 Homologous recombination
NCTC11323_00898 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_00898 (recJ)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC11323_00898 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC11323_00898 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC11323_00898 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
tRNA_anti-codon
ThiG
Motif
Other DBs
NCBI-ProteinID:
SQH55433
UniProt:
A0A2X4NCI0
LinkDB
All DBs
Position
1:complement(888080..890335)
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AA seq
751 aa
AA seq
DB search
MGIKYKWLYPINNENFLMQLEEYNISKNIAKILDSRGIHEISEVKKFFSDDYEEGYDPFL
MHDMKRAVDRINDAIENEEKILVYGDYDADGITSTVLLVETLISLGANVSSYIPNRFDEG
YGPNKEAFTKIIESGITLIITVDNGIAGVEEVNLANELGCDVIITDHHKIQDVIPSAYAV
IHPEHPDGNYPFGKLAGVGVAFKLAHALLEIFPDFLLDLVAIGTIADMVSLTDENRIFVK
QGLELINEDPRIGIKMLLELSGITSKVDEQTIGFYIAPKLNSIGRMSSAKLGLSFLMAED
AYDAKILAEKIEEYNIQRKSVTEDIVKDIISKIENSDKKNKNVIMIYGDYHEGVLGIVAS
NIVERYQRPVLIMTNKDGILKGSARSIFDFNIYTAVNKIGDKFIAYGGHTLAAGFSFEEN
NFETIEEELNKDFAEYKNTNELKSTKTIDIVTSLEEMSYQFLNSLDALKPYGMDFEKPTI
LLENAKILDKAYFGAEKQYMRLTIADEVGSLECISFKENSAFNSIEKNDIIDLLCTLDKN
NFNGRTKLQAHIIDMEIKEFLFEDLRGINFNIDNIPNNCLKLSKHLVNKENNFYSYKDLA
DIDETFENIYLLDIPQNRKQVEELLELKPKKIHLVCSESKVMSDIYKIDKNRLIKLFNLL
INSSNKQINISQHLDSILKVLVTNVDSLKIMIQIFQELNLVTVENNTIILNPDYEIVDLK
KSSSFVRMENIFEMERIFLKESIENINKVFS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggggattaagtataaatggctctatcctataaataatgaaaactttctaatgcagctt
gaggagtacaatatttcaaaaaatattgccaaaattcttgattctagaggaattcatgaa
ataagtgaagtaaaaaaatttttttctgacgattacgaagaaggatatgatccgttttta
atgcacgacatgaaacgtgcagttgatcgaatcaacgatgcaatagaaaatgaagagaag
attcttgtatatggggactatgatgctgatggaatcacctcaacagtattattagtggaa
acattgatatcacttggtgctaatgtttcgtcatatattcctaatagatttgatgaagga
tatggtcctaataaagaggcatttacaaaaattattgaatctggtattacattaattatt
acagttgacaatggtattgcaggtgtggaagaagtaaaccttgcaaacgagcttggttgt
gatgttattattactgatcatcacaaaattcaagatgttatccctagcgcttatgcagtt
attcatccagagcatccagatggtaattatccatttgggaaacttgctggagtaggagtt
gcatttaaacttgctcatgctttattagaaattttcccggattttcttttggatttagtt
gcaataggaacaattgcagatatggtatcattaactgatgaaaatagaatctttgttaaa
caaggattagaattaattaatgaagatcctcgtatcgggataaaaatgttactagaatta
tcaggtattacttcaaaagttgatgaacaaactattggtttttatattgcacctaagctg
aattctattggtcgtatgagtagcgctaagttaggtctatcttttttaatggcagaagat
gcttacgatgcaaaaattcttgcggaaaaaatagaagagtataatattcagaggaagtct
gttacagaagatatagtgaaggatattatttcaaaaatagaaaatagtgataagaaaaat
aaaaatgttattatgatttatggagattatcatgagggtgttttgggtatagttgcctct
aatattgtggaaagatatcaaagaccggttcttattatgactaataaagatggaatctta
aaagggtctgcgagaagtatttttgattttaatatttatactgccgtaaacaaaattgga
gataaatttattgcttatggtggacatacattagctgccggtttttcttttgaagaaaat
aattttgaaacaattgaagaagaacttaataaagattttgcagaatataaaaatacaaac
gagttaaaatcaacaaaaactattgatatagtaacttcattagaagaaatgagttatcaa
tttttaaattcgttagatgcattgaagccttatggtatggactttgagaagccaacaatt
ttattagagaatgctaagattttagataaagcatattttggcgcagagaaacagtatatg
agattaactattgcagacgaggttggaagtttagaatgtataagttttaaagagaattcg
gctttcaattctatagaaaagaatgatattattgatttactttgtactttagataaaaat
aattttaatggtcgcactaaattacaagcacatattattgatatggaaattaaagaattt
ttattcgaagacttacgtggaataaactttaatatagataatattccaaataattgctta
aaactttctaagcacttagtaaataaagagaataatttttatagttacaaagatttagca
gatatagatgagacatttgaaaacatttatttattagatataccacaaaatcgtaaacaa
gtagaagaattattggagttaaaacctaaaaaaatacacctagtttgttcagaaagtaaa
gtaatgtctgatatttataaaatagataaaaatagattaataaagctatttaaccttctt
ataaactcatccaacaaacaaataaatatatctcaacatttggattctatattaaaagtg
ctggttaccaatgttgatagtcttaaaataatgatacaaatttttcaagagttaaattta
gttacggttgaaaataatacaattattttaaatcctgattatgaaattgtagacttaaaa
aaatcttcaagttttgttagaatggaaaatattttcgaaatggagagaattttcctaaaa
gaaagtatagagaatattaataaagtattttcataa
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