Gemella morbillorum: NCTC11323_01243
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Entry
NCTC11323_01243 CDS
T05494
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03030
DNA replication
gmo03410
Base excision repair
gmo03420
Nucleotide excision repair
gmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11323_01243 (polA_1)
03410 Base excision repair
NCTC11323_01243 (polA_1)
03420 Nucleotide excision repair
NCTC11323_01243 (polA_1)
03440 Homologous recombination
NCTC11323_01243 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmo03032
]
NCTC11323_01243 (polA_1)
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_01243 (polA_1)
Enzymes [BR:
gmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11323_01243 (polA_1)
DNA replication proteins [BR:
gmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC11323_01243 (polA_1)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC11323_01243 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11323_01243 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DUF6235
Motif
Other DBs
NCBI-ProteinID:
SQH55764
LinkDB
All DBs
Position
1:complement(1251656..1254277)
Genome browser
AA seq
873 aa
AA seq
DB search
MDKIILLDGNSLSYRAFYAMPALQNKSGLYTNSVYGFTLMLERMLEDIKPKYALVAFDKG
KQTFRHKTYKDYKGTRDKTPSELVEQFGYVRELLDSYGIKYEEHFDYEADDIIGSYAKLA
EKAGLEVIIISGDKDLTQLASDNITIYYTRRGVTEVDHYTPEFINEKYGLSPEQIIDMKG
LMGDKSDNIPGVAGIGEKTAIKLLAEYKTVENVLDNIDNISGKKLKERLAEGKEDALLSK
ELATIFTEVPVENKLEDLTFSENRSKKKELFEKLEFVSFLKKLAENNDVDVDGKEEKELE
IINADEKTELSFENSSLHIECFTEDYHNSDVVNIAVYKDENVYIFSEDNFFENKFVRNYL
ESDAEKVVYDYKKILYIAKRNGISDIAGNVFDVKIASYLLDVTVKTELDKIVFNTLGNII
KSEEEIYGKGVKRTLPTNEILYPYLAQVVKSIFDLKEIQSARLKEENMDSLYKNIEVKVA
RVLANMEYEGIHVSKKALEDMSDELDERIKILEASIHTLAGSEFNIASPKQLGIVLFEDL
GLPPVKKTKTGYSTSVEVLEQLQHSHEIIPLIMEYRVLTKLNSTYAKGLVKDITRKGKIH
TRYEQTLTQTGRLSSVNPNLQNIPTRIEEGKKIRKAFIPASDDRVILSIDYSQIELRVLA
HMAQDKGMIDAFTHDLDIHTKTASEVNGVSLDEVTSTMRREAKAVNFGIVYGISDFGLSN
NLGITRKRAKEFIDKYLETFSGVNKYMTDIVEFAKEHGYVETLYNRRRALPEINAKNKIV
ASLNARLAMNTPIQGTAADIIKLAMINAFDYIEKTKVDAKLLLQVHDELIFDVNKDVVDE
FAIEMVKIMEEAVELDVKLKAEASSGSSWYDTK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataattttattagatgggaatagcttgagttatcgtgctttttatgctatg
cctgctctacaaaacaaaagtggcttatataccaatagtgtatatggttttactttgatg
ttagaaagaatgttagaagatataaagccaaagtacgcattagtagcttttgacaaaggg
aaacaaactttccgtcataaaacttataaagattataaaggtacacgagataaaacacca
agtgaacttgttgaacaatttggctatgtaagagaattgctagactcttatggaataaaa
tatgaagagcactttgattatgaagctgatgacattataggaagctatgctaagctagca
gagaaagcaggtcttgaagtaataattatttccggagataaagacttaacacaattagct
agtgataatattacaatctactataccagacgaggagttactgaagttgatcactatact
ccagaatttatcaatgaaaaatatggtttgagtccagaacaaatcattgatatgaagggc
ttaatgggagataaaagtgataatataccaggggtagctggtataggagaaaaaacggcg
ataaaattgctagctgaatacaaaactgtagaaaatgttttagataatattgataatatt
agcgggaaaaaactaaaagaacgtttagcagaaggtaaagaagatgctttacttagtaaa
gaacttgctacaatttttacagaagttccagtagaaaacaagttagaggatttaactttt
agtgagaatagaagcaagaaaaaagaattatttgaaaaattagagtttgtttctttctta
aaaaaattagctgaaaataacgatgtagatgttgatggaaaagaagaaaaagaactagaa
ataataaatgctgatgaaaaaacagaactatcttttgaaaatagttcactacatattgaa
tgttttacagaagattatcataattcagatgttgttaatatagcagtatacaaagatgaa
aatgtctatatttttagtgaagataacttctttgaaaataaatttgtgcgtaactatttg
gaaagtgatgcagaaaaagtagtttatgattacaagaaaatcttgtatattgcgaaaaga
aatggtatttccgacatagctggtaatgtttttgatgtaaaaattgcttcatatctttta
gacgttacggtaaaaacagaacttgataaaatagtatttaataccttaggtaatattata
aaaagtgaagaagaaatctatggaaaaggtgtaaaacgtacattgccaaccaatgaaatt
ctttatccgtacttagcacaagtagtaaaaagtatttttgatttaaaagaaattcaaagt
gcgagattaaaagaagaaaatatggattctctttataaaaatatcgaagtaaaagtagcg
cgtgttttggctaatatggagtatgaaggaatacatgttagtaagaaagcattagaggat
atgagtgatgagttagatgagcgaataaaaatacttgaagcaagtattcatacgctagcg
ggttcagagtttaatattgcctcaccaaaacaattgggaatagtattatttgaagattta
ggattaccccctgtaaagaaaacaaaaacaggttattctacgtcggtggaagtattagaa
caacttcaacatagccatgaaatcatacctttaataatggagtatagagtattaacaaaa
ttgaactcaacttatgccaaaggtttggttaaagatattactcgtaaagggaaaattcat
acacgttatgaacaaacattaacacaaacggggcgattgtcatctgttaatccaaacttg
caaaatattcctacgagaatagaagagggtaaaaaaattcgcaaggcgtttattcctgct
tcggatgatagagtaatattatctatcgactattctcaaattgaactacgtgtattagcc
catatggcacaggataagggaatgattgatgcatttactcatgatttagatattcatact
aagacagctagtgaagtaaatggagtaagtttagatgaggtaacttcaactatgcgtaga
gaggctaaagccgtaaactttggtatagtttatggaatttctgactttgggttatcaaat
aacttaggaataacacgcaagagagctaaagaatttattgacaaatatttagaaacattt
agtggtgttaacaaatatatgacagatatagttgagtttgctaaggaacatggatatgta
gaaactttatataatcgccgtcgtgctttaccagaaattaatgctaaaaataaaatagta
gcaagtctcaatgcgaggttagctatgaatacgccaattcaaggtactgcagctgatata
ataaaacttgctatgataaatgcttttgactatattgaaaaaacaaaagttgatgcaaaa
ttattacttcaggtacatgatgaacttatttttgatgtaaataaagatgtggtagatgag
tttgctatcgaaatggtaaaaattatggaagaagcggtcgaactagatgttaagcttaaa
gcagaagctagtagcggaagctcgtggtatgacactaaataa
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