Gemella morbillorum: NCTC11323_01424
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Entry
NCTC11323_01424 CDS
T05494
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03030
DNA replication
gmo03430
Mismatch repair
gmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11323_01424 (polC)
03430 Mismatch repair
NCTC11323_01424 (polC)
03440 Homologous recombination
NCTC11323_01424 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmo03032
]
NCTC11323_01424 (polC)
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_01424 (polC)
Enzymes [BR:
gmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11323_01424 (polC)
DNA replication proteins [BR:
gmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11323_01424 (polC)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11323_01424 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
DNA_pol3_a_NI
DNA_pol_A_exo1
HHH_3
T2SSK
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
SQH55940
LinkDB
All DBs
Position
1:complement(1436379..1440719)
Genome browser
AA seq
1446 aa
AA seq
DB search
MSKEHFSLLVKTLELEKKLANENFTNFSLDNIEKDNKNKMWTFNFSGRSLPSSEEFALFI
QKLRESFQGEYLVKYCLNIEKKVSIEEIKEYWKFVILENFSELAPVLLESILFSKIDVKD
NILSLNIMAPSIWNNFINEKKSQILGSYANLGITLKDIRPIFSKTDVDAVLENQEEKINK
EITKLEEAEKEIKKNIKETEKNVFKNGGGNRYGKEIQDEDIVEIKDVVGYAGDAVIMAQV
FGTEEIVHRNGSTQYRLKLTDYSDSILLRLFGNNPNPKFQNKRRNELIELVKGLKKGQWI
KVHGTVSNDPYLRDTIIEPKAIEVVAKEEKKDNYSGKKRIELNTHTKMSQLEGISTAKDY
LARALAWGHEAIAFTDTYGVQAYPEICLGSKGKDIKPIYGLNAFIMDDSITATTNPKKLK
LREATYVVFDVETTGLSAERDRLIEIAAVKVKNGAEIDSFESYINPERPISELITRLTSI
TDDDVRDAPVEKEVMTDFYNWLDEDDILVAHNAKFDLGFIDKSFERLGLENKNNASIDTL
FISRAENKEAKRHGLSNLAKMYKVRLVQHHRAIYDTKATAEIFIKMLNQLYALGIEHHNE
IDNKIDLKFAHKRSRTFPCSILVKNAKGLKDLFRLVSYSCTEYLSSGKPTIPRSLLEQYR
QDLLIGSGNSENEVFEELLNSKEDKVESIIDFYDYIEIQPMNHYESFITNERIADKTELE
IILKKLISLSKKKGKIVVATGDCYYLDEYQHVYRQILRLSVKNNPGARDIKPMATFLTTE
EMLEEFSFLDKELREEIVIENTHKISDKIELVVPLKDKLYTPNIEGAADEVRNLSYSMAH
KIYGEELPEIVEKRLEKELTSIIGNGFSVVYLISHKLVKKSLDDGYLVGSRGSVGSSLVA
TMMEITEVNPLAPHYVCPKCKHSEFFLNAEYASGFDLPNKNCPHCDVKMTKDGQDIPFET
FLGFNGDKVPDIDLNFSGEYQATAHNFTKEIFGEDYVYRAGTIATVAEKTAYSFTRDYYE
KNEIEKRNIDLERIAAGCEGAKRTTGQHPGGILVVPNDMDIFDFTPYQYPADDETSSWRT
THFDFHSIHDNILKFDILGHDDPTMIRKLQDLSGINPKTIDVSDPEVMGIFSGVEALGVT
REQVNSASGTFGIPEFGTNFVIQMLDDTKPTTYSELVQISGLSHGTDVWLGNAQELIRNG
TCELKDVIGCRDDIMVYLIHAGLEEGLAFTIMENVRKGKGLTEDFEAAMKENDVPAWYID
SCKKIKYMFPKAHACAYVLMALRIAWFKVHQPLTYYCAYYSVRASDFDIITVVKGEKSLK
AKIEEIKTTDKNELTAKDKDALVSYEIANEMMERGFTFSKVDLEKSASHDYIMEGNTLIP
PFSIVPGLGDNVAKKIVQARLEKPFLSIEDFSKRGSVSSTVVEYLREMGTLKGLPERAQL
SFFDEL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaacatttttctctgttagtgaaaacacttgaattagaaaagaaattggca
aatgaaaattttactaatttttctttagacaatattgaaaaagataataaaaataaaatg
tggacttttaactttagtggtagaagtttgccttcttcagaagaatttgcattatttatt
caaaaattaagagaaagttttcaaggagagtaccttgttaaatattgtttaaatattgag
aagaaagtatctattgaggaaataaaagagtattggaaatttgtaatattagagaacttt
tctgagctagctccagtattattggagagtattttattcagtaagattgatgttaaggat
aatattttatctcttaatattatggctccatctatttggaataattttataaatgagaaa
aaatcacagattctaggtagttatgctaatttaggaattactttaaaagatattagacca
attttttcaaagacagatgtagatgctgttcttgaaaatcaggaagagaaaataaacaaa
gaaataacaaaattagaagaagcagaaaaagaaattaaaaaaaatattaaagaaacagaa
aaaaatgtatttaagaatggcggcggcaatcgttatggaaaagaaatacaagatgaagat
atagtggaaataaaagatgtagtaggatatgctggcgatgctgtaataatggcacaagta
tttggaacagaagaaatagttcatagaaacggttctactcaatatcgattaaaacttaca
gattatagtgattctatccttcttagattatttggaaataatccaaatcctaaatttcaa
aataaacgccgtaatgaattaatagaacttgttaaaggccttaaaaaaggtcaatggata
aaagttcatggaacagttagcaatgatccgtatcttcgtgatacaattattgaaccaaaa
gctatcgaggttgtagctaaagaggagaaaaaggataattattctggaaagaaaagaata
gagctaaatactcatacaaaaatgagtcaattggaagggatatctacggcgaaagattat
ttagctcgtgctctagcttgggggcatgaggcgattgcttttacagatacttatggtgtt
caagcatatccagagatttgtttaggttcgaaaggaaaagatataaaacctatttatgga
cttaatgcattcataatggatgatagtattacagcaacaactaatcctaaaaaattaaaa
ctaagagaggctacttatgtagtgtttgacgttgagacaacaggattatcagctgaacgc
gatagactaatagagattgctgctgtaaaagtaaaaaatggagcagaaattgatagtttt
gaaagttatattaatcccgaacgaccaatttcagaattaattacacgacttacgagcatc
acagatgatgatgtacgagatgctcctgttgaaaaagaagtaatgaccgatttttataat
tggttggacgaagatgatattcttgttgcccacaatgcaaaatttgacttaggatttata
gacaagagttttgaacgcttaggtttagaaaataaaaataatgctagtattgatacgcta
tttatttcaagagcggaaaataaagaagctaaacgacatggacttagtaatttggcaaaa
atgtataaagtacgcttagttcaacaccacagagcgatttacgatactaaagcaacagct
gaaatttttataaaaatgctgaatcaactttatgcattaggtattgaacatcataacgag
attgataacaaaatagatttgaaatttgcacataaaagatcacgaacattcccttgttct
attttggtgaaaaatgccaaagggttaaaagatttatttaggttagtttcgtatagttgt
acagaatatttatcatcaggaaagccgacaattccgcgcagtcttcttgaacagtatcgt
caagatttactaatcgggagtggtaatagcgaaaatgaagttttcgaagaattattaaat
tcaaaagaagacaaggtggaaagtattatagacttctacgattatatagaaatccagcct
atgaatcactatgaaagttttattacgaatgaaagaatagctgataagactgaattagaa
attattttgaagaaactaataagtctttcaaagaaaaaaggtaaaatagtagtggcaaca
ggtgattgttattatttagatgaatatcaacatgtttatcgtcaaattttacgcctttct
gttaagaataatccaggtgcgcgtgatattaaaccgatggcgacatttttaacaacagaa
gaaatgttagaagaattttcatttttagataaagaacttcgtgaagagattgtaatagaa
aatactcataaaatatctgataaaatagaattggttgtgccacttaaagataaactttat
actccaaatatagaaggagctgctgatgaagttagaaatctaagttatagtatggcacac
aaaatatatggagaagagttaccggaaatcgttgaaaaacgtctagaaaaagagttaact
tcaataataggtaatggattttcggttgtttatcttatttcacataaacttgtaaaaaaa
tctcttgatgatggatatttagtaggatcaaggggatctgttggttcttcattagtagca
acaatgatggaaattacggaagtgaatccattagccccacactacgtttgtcctaagtgt
aaacatagcgaatttttcttaaatgcagaatacgcttcggggtttgacctgcctaataaa
aattgtccgcattgtgatgttaaaatgacaaaagatggacaagatattccatttgaaact
ttcttaggatttaatggggacaaagttccagatattgatcttaacttctctggagaatat
caagcaacagcacataattttacaaaagagatttttggtgaagattatgtatatcgtgcg
ggaacaattgctactgttgctgaaaaaactgcatattcatttacgcgtgactattatgaa
aagaatgagatagaaaaaaggaatattgacttggagcgtattgcagcaggatgtgaggga
gctaagagaactactggtcagcacccagggggaatcttagttgtgcctaatgatatggat
atttttgatttcacaccttatcaatatcctgcagatgatgaaacaagttcgtggagaact
actcactttgacttccattcgattcatgataacattttgaagtttgatatacttggtcac
gatgatccgacgatgattagaaagcttcaagatttatcaggtataaacccaaaaacaatt
gacgtatcagatccagaagttatgggaatattttctggagtagaagcgttgggtgttaca
agagaacaagttaactcagcgagtggaacttttggtattccagaatttggaacaaacttt
gtaattcaaatgttagatgatacaaagccaacaacgtactcagagctagtccaaatttca
ggattatctcatgggacggatgtttggttaggaaatgcccaagaattaattcgtaatgga
acatgcgagttaaaagatgttataggatgtcgtgatgatattatggtttatttgattcat
gcaggcttggaagaaggactagcttttacgataatggaaaatgttcgtaaaggtaagggt
cttacagaagattttgaagcggcaatgaaggaaaatgatgtgccagcctggtatatagat
tcttgtaaaaagattaaatacatgttccctaaagcccatgcctgtgcttatgtgcttatg
gcattacgtattgcatggtttaaagttcatcaaccactaacttattattgtgcgtactat
agcgtaagggcaagtgattttgatattatcacggttgtaaaaggtgaaaagagcttaaaa
gctaaaatagaagaaataaaaacaacagataaaaatgaattaacagccaaagataaggat
gctttagtcagctatgagatagcaaatgaaatgatggagagaggattcacattttctaaa
gttgatttagaaaaatcagcaagtcatgattatataatggaaggtaatacgttgattcct
ccattctctatagtaccaggacttggtgacaacgtcgcgaaaaaaatagttcaagctcgt
ttggaaaaaccatttttatctattgaagatttttctaaacgaggtagtgtatcttcaaca
gttgttgagtatttaagagaaatgggtacgctaaaaggattaccagaaagagcgcaatta
tcattttttgatgaattataa
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