Gemella morbillorum: NCTC11323_01618
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Entry
NCTC11323_01618 CDS
T05494
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03030
DNA replication
gmo03430
Mismatch repair
gmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11323_01618 (dnaE)
03430 Mismatch repair
NCTC11323_01618 (dnaE)
03440 Homologous recombination
NCTC11323_01618 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmo03032
]
NCTC11323_01618 (dnaE)
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_01618 (dnaE)
Enzymes [BR:
gmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11323_01618 (dnaE)
DNA replication proteins [BR:
gmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11323_01618 (dnaE)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11323_01618 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SQH56120
LinkDB
All DBs
Position
1:complement(1641949..1645227)
Genome browser
AA seq
1092 aa
AA seq
DB search
MVYYNLQVHSAYDLLNSTIKYKELFEKLKSDNQDSVVIVDPNMYGAIKAYKEAKKTGINL
ISGLEVKLGYGISFLTFNILCKNERMFHKLFELSTRFLNEEELSLEAFLAEIKDFKDDFV
LIVTSELRDSIEFSYLQEQLIGYDFYFGFNEKFNYSIYTYYDNIVYTKPSYYLNKDHYQQ
VVVARAIRDNTKLNIRELTTTIGDHFVRSVQDFSLLLESDNEEYIFMFQKSLDNQQRIID
KCRYELEFSGYHLPKYIYGEHEDVFAKMSAKDYLRYLVQKGAKEKLVGKDYYAYKKRYEY
ELKIIDDMGFNDYFLIVYDFVKYAKDNGILVGAGRGSAAGSLVCYLLNITEADPLEYNLL
FERFLNKERISMPDIDIDFQDTRRDEVIKYVEGKYGEDKVAQIITFTTFQSKSAARETAR
ILQFNEEDLKFISSNVSSTRTLTECYEVSENLRNFVNKSDLNRRWFSIALSLEELPKNPS
VHAAGIVISDDKPLIKHTPLAASNVTKYLTQWTMDDVESVGLLKIDFLGIRYLTMVSNIV
EQIKKDNPSFDITKINYADQKVYNLFTQGRTEGIFQFESSGMKEKLRLLRPTEFNDIVAM
NALYRPGPMAQIETYVRRKHGEEKVVYPHPHLEKILRDTYGVIVYQEQIMLIAVNFAHMS
LNEADNMRRAVSKKKKEDLEYYGRIFIEKSVAAGYDLNIAKKLFDLIVTFANYGFNKSHA
VVYSMLAYRLAYLKVYYTKYFMTALLNNVISSEKKINEYKQELNNLGITLAKPDVNVSLS
DFSVYKQDIVFALTAIKNVGYRSSYEIVQDRLNFGKYQDIDDFLKRMNKKVDYQAAQSLV
KAGALDTFGYNRATLMKKVKDYYEDDRKYINNVRVALSAESGLTLKVEEIEDYPIAEKIQ
MEKEVTGTYFLKHPVQVEKEKYAYLPLRYIGRDVSDSYVEVITKKEIKTKKGEYMAFLTV
NDGKNDYDVTVFPSVYKYASGFIKVGEFSVMTLKKQIRNNREQYILEKIASLKNYNDYCL
NNIKIIYIIESKDVLELLQEYKVEDSGVEVVLFQNNNTDKARKFHIENEQLFVHKFLNKF
PGKRIKIEYSKK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggtttattataatttgcaagttcatagtgcgtatgatttactcaatagtacgataaag
tacaaagaattgtttgagaagctaaagagtgacaatcaagattcagtagtaatagtcgat
cccaatatgtacggagcgataaaagcttataaagaagctaaaaagactggaataaattta
atttcgggattagaagttaagttgggatatggtattagttttttaacttttaatatttta
tgtaaaaatgaaagaatgttccataaattatttgagttatcaactcgctttttgaacgag
gaagagttatcgttagaagcttttttagcggagataaaagattttaaggatgattttgtt
cttattgttactagtgaattaagagacagtatagaatttagttatcttcaagaacagtta
atcggatatgatttttattttggttttaatgaaaaatttaattacagtatttatacatat
tatgataatatcgtttatacaaaaccaagttattatttaaataaagaccactatcaacaa
gtagttgtagcgcgggctataagagataatactaagttgaatataagagaattaacgaca
actattggagatcattttgtacgtagcgtacaagatttttctttacttttagagtcagat
aatgaagagtatatttttatgtttcaaaaatctctagataatcagcaaagaataatagat
aaatgtcgttatgaattggaattttcgggttatcatcttcctaaatatatttacggagag
catgaagatgtttttgcgaaaatgtctgctaaggactatcttcgatacttagttcaaaaa
ggagctaaggaaaaacttgttgggaaagattattatgcatataaaaagcgttatgagtat
gagcttaagattattgatgatatgggctttaacgactacttcttgattgtttatgatttt
gttaaatatgcaaaagataatgggattttagttggagcaggacgtggtagcgcagcagga
agtttggtatgttatttactaaatattactgaagctgatccacttgaatataacttgctt
ttcgaacgtttcttaaacaaagagcgtatttcgatgccggatatcgatattgactttcag
gatacacgtcgtgatgaagtgataaaatatgtggaaggaaaatacggagaagataaagtt
gcacaaattattacctttacaacatttcaatcaaagagtgctgctagagaaacggcaagg
atactccagtttaatgaagaggatttgaaatttatcagcagtaatgtaagttctacaaga
acattaaccgaatgctatgaagtatcagaaaatcttagaaattttgttaataaaagtgat
ttgaatcgacgttggttctctattgcattaagtcttgaagaattgccgaaaaatccttcg
gttcacgcagcgggtatagtaataagtgatgataaacctttgattaaacatacgccattg
gctgcttcaaatgtaacaaaatatttaacacagtggactatggatgatgttgaaagtgtt
ggacttttgaagatagactttttagggattcgttatttaacgatggtttcaaatatagtc
gagcaaattaaaaaagataatcctagttttgatataacgaagattaattacgctgatcaa
aaagtatataatttgtttacacaaggaagaacggaaggtattttccagtttgaatcaagc
ggaatgaaggaaaaacttcgtttgcttcgtccgacagaattcaatgatatagttgcgatg
aatgctctttatcgcccaggacctatggcacagatagagacttacgttcgtagaaaacat
ggtgaagaaaaagttgtttacccgcatccacatctggaaaaaatattaagggatacttat
ggggttatcgtttatcaagagcaaattatgcttattgcggtgaactttgctcatatgtca
ctgaatgaagctgataatatgcgtagagcggtgagtaaaaagaaaaaagaagatttggaa
tattacggacgaattttcattgagaaaagtgtagctgcgggatatgaccttaatatcgcg
aaaaaactttttgacttgatagtaacatttgctaattacggatttaacaagagtcacgca
gttgtttatagtatgcttgcttatcgtttggcatacttaaaagtttattatacaaagtat
ttcatgacagctcttctaaataacgtaattagtagtgagaagaaaattaatgaatataaa
caagaattgaataatctagggattaccttggctaagccagacgtcaacgttagtttaagt
gattttagtgtttataagcaggatattgtttttgcattaacggcgataaaaaatgttggt
tatcgcagtagttatgagattgttcaagatagacttaatttcgggaaatatcaagatata
gatgatttcttaaaacgtatgaataaaaaagttgactaccaagcagcgcagtcattagtt
aaggctggagcattggatacttttggttacaatcgtgcaacacttatgaaaaaagttaaa
gattactatgaagatgaccgtaagtatataaataatgtaagagtagccttatcagcagaa
tcaggcttaactttgaaggttgaggagatagaagattacccgattgctgaaaaaattcaa
atggaaaaagaggtcacaggtacatatttcttgaagcatccagttcaagtagaaaaagaa
aaatatgcttatttacctcttcgatatattgggcgagatgtaagtgatagctacgttgag
gttatcaccaaaaaagagataaaaaccaagaaaggtgagtatatggcctttctaactgtt
aatgatggcaagaatgactatgatgttacggtgtttccaagtgtctataaatatgcgagt
ggttttattaaggttggagagttttctgttatgactctgaaaaagcaaattcgcaacaat
cgagaacaatatattttagagaagatagcgagcttaaaaaattataatgattattgctta
aataatataaaaataatttacattatagaaagtaaagatgttttggaattattacaagaa
tataaggtagaagattctggtgtagaagtggtattattccaaaataataatacagataaa
gcgcgtaaattccacatagaaaatgaacaattatttgttcataaatttttgaataaattc
cctggaaaacgcattaaaatagaatattcaaagaaataa
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