Gimesia maris: GmarT_00060
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Entry
GmarT_00060 CDS
T06180
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmr03016
]
GmarT_00060 (truD)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GmarT_00060 (truD)
Transfer RNA biogenesis [BR:
gmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GmarT_00060 (truD)
Prokaryotic type
GmarT_00060 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEG14173
LinkDB
All DBs
Position
complement(6242..7312)
Genome browser
AA seq
356 aa
AA seq
DB search
MPEPETEVLPYLTEGLPGTGGELKQTPEDFIVEEIPVYAPSGEGDHLFLWVEKRDVSAQF
LVKILSEKLRVDSREIGVAGLKDRCAITRQMVSVPVECEPLLEGFAFDGIRILQATRHER
KLKTGHLKGNRFTLLLKETSENAFANAKAIQEKITEFGFPNFYGAQRMGRDNETLRMGMK
LLKNEKVSAKYFRNKSLKRLALSAAQSCLFNRALSQRVSAKNLHTVQQGDIMQVCESGGL
FVVEDVAAEQQRFDQRETVITGPIFGPKMKQPADQVLEAETAILQEFSLEPAYFSRFKKL
TPGARRPFLIWPKDLKISQTADGIQFDFTLPSGVYATMLLREFMKNETAAMTPGDS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccagaaactgaagtgctgccttatctgacggaaggcttaccgggaaccggc
ggtgaattaaaacagacccccgaagactttatcgtggaggagatcccggtctacgcccct
tcgggtgaaggagatcatctgtttctgtgggtggaaaaacgggatgtctcggcgcagttt
ctggtaaagattctgtcagaaaagttgagagtcgattcacgggaaattggtgtggccggc
ctgaaagaccgctgtgccatcacgcggcaaatggtctccgttcctgtagaatgtgagcct
ttgctggaagggtttgccttcgatggcattcgcattctgcaggcaacccggcatgaacgg
aaactgaaaaccgggcatctcaaagggaaccgcttcacactgttactgaaagaaacttct
gagaatgcgtttgctaatgcgaaggccattcaggagaaaattacagagttcggctttccc
aacttttatggtgcgcagcgaatgggccgcgataatgaaacgttgcgaatgggaatgaag
ctgttaaaaaatgaaaaggtctccgccaaatactttcggaacaaatcactgaaacggctg
gctctgtcggcggcgcagtcctgtctgtttaatcgggcactctctcaaagggtctctgca
aaaaacctgcatacggttcagcagggcgatatcatgcaggtttgtgaatcggggggtctg
tttgttgttgaagatgtcgctgcggagcaacagcggtttgatcagcgggaaaccgtcatt
accggtcctattttcgggcctaaaatgaaacagcctgccgatcaggttctggaagcggag
actgcgattctgcaggagttctccctggaaccggcatacttttcacgtttcaaaaaactg
actcccggtgcccgccgaccattcctgatctggccgaaagatcttaaaatcagtcagacg
gcggacggcatccagtttgattttacgctgccttccggcgtgtatgcgaccatgttgctc
agggaatttatgaaaaacgagacggctgccatgacgccaggcgactcgtga
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