Gimesia maris: GmarT_10910
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Entry
GmarT_10910 CDS
T06180
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmr03032
]
GmarT_10910 (topA)
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_10910 (topA)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GmarT_10910 (topA)
DNA replication proteins [BR:
gmr03032
]
Prokaryotic type
DNA Topoisomerases
GmarT_10910 (topA)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GmarT_10910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QEG15251
LinkDB
All DBs
Position
1360351..1363080
Genome browser
AA seq
909 aa
AA seq
DB search
MAKKKLKALVIVESPAKAKKIGSYLGSDYKVLASMGHVRDLPTKASDVPSEFKKKHKWAT
LGVNVESEFEPYYLVPKEKKKTVKELKDALKDAEELILATDEDREGESIGWHLAELLKPK
VPVKRMVFSEITEEAIQEAIANPRELDLNLVSAQETRRVLDRLYGFTLSPLLWKKIARGL
SAGRVQSVAVRILVQRELERLAFKSGTYWDLKAQLKTGEGAEFESMLMTVDGKKVASGKD
FDESTGKLKEGADVLLLNEQQADDLLERVKKSDWTVTSVEQRMQSRKPPAPFTTSTLQQE
GNRKLNMSARETMQVAQRLYEDGHITYMRTDSVNLSNEAVSASRKRIEDMYGKDYLSPEI
RRFDTKSKGAQEAHEAIRPAGKSMKTVEELGLKGQQAKLYAMIWKRTMATQMEEARLRFQ
TVTITADNAEFRATGRHVEFPGFFRAYVEGSDDPEAALDDSESMLPPLEENQALEASEVE
PLKHETKPPARYTEATIVRKLESEGVGRPSTYASIIGTIQDRGYVKKTGSQLVPTFTALA
VTRLLEKFFPNLVDLQFTAAMEQELDDIAVGEGDRLPYLNQFYRGEAGLDEQVKAKEETI
DAREICTLDLEGITSAVRVGRYGPYVSNEAEEEPVSASIPDNIAPADLTNELAEKLIRLK
AEGPKSLGMHPEENTPIYKLHGPFGPYLQLGDVVEDGPKPKRVSIPKNVDPDTIDFETAL
KYLSLPRALGEHPETGKKVNAGIGRFGPYVLHDKVYKSLGKEDDILTIDLPRAVELLKQA
RKRSAPTPIRDLGKHPEDEEPIGIFDGRYGPYVKHGKINATIPKGYEVDNVTLDQAMEWL
EAKAEKKGVKKAAKKKATAKKKSAAKKTTKKTAAKKTTKKAAAKKKTTKKKAAKKTTKKK
TAKKEESED
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagaagctgaaggcactggtgatcgtggaatcaccagcaaaagccaagaaa
atcggcagctatttaggcagcgactataaagtcctggccagcatgggccacgtacgcgat
ctgcctacgaaagcctccgatgttccttccgaattcaagaaaaaacataaatgggcgacc
ctgggggtcaatgtcgaatccgaattcgaaccttattatctggtccccaaagagaagaaa
aagacggtcaaagaactgaaagatgccctgaaagatgctgaagagctcattctcgcgacc
gacgaagaccgcgaaggtgaaagtatcggctggcatctggccgagctgcttaaaccaaaa
gtccccgtcaaacgcatggttttctcggaaattaccgaggaagccattcaggaagcgatc
gccaaccctcgcgaactcgatctgaacctggtctcggctcaggaaaccaggcgtgtactc
gatcgactgtacggttttacattgagcccgctgttatggaagaagattgcccgcggtctg
tctgccggccgcgttcagtcggtcgcggtgcggattctggttcagcgcgaactggaacga
cttgccttcaaaagcggtacttactgggatttgaaagcccagctcaaaacaggtgagggc
gccgaattcgaatcgatgctgatgacggtcgacggtaaaaaagtcgccagtggtaaagat
ttcgacgaatcgacgggtaaactcaaagaaggcgccgatgtactgctgctcaatgaacag
caggccgatgatctgctggaacgcgtcaagaaatctgactggaccgtgacgtctgttgaa
cagcgaatgcagtcccgcaagccgcctgctccttttacaaccagtaccctgcagcaggaa
ggtaaccgcaagctgaatatgtcggcccgggaaaccatgcaggtggcccagcgtctgtat
gaagacggtcacattacctatatgcgtaccgatagtgtcaatctctccaacgaagcggtt
tctgcttcgcgcaaacggattgaagacatgtacggtaaagattatctcagccccgaaatc
cgccgcttcgataccaagtccaaaggggcacaggaagcacacgaagcgatccgacccgcc
ggaaaatcgatgaaaaccgtggaagagcttggcctcaaaggacaacaggccaaactgtat
gccatgatctggaagcggaccatggccacccagatggaagaagcccgtctgcgtttccag
actgtcacgatcacagccgacaatgcggaattccgggccaccggtcgtcatgttgaattt
cccggtttcttccgtgcgtatgtagaaggctctgatgatcccgaagcagcattggatgac
agcgaatcaatgctgcctccgctggaagaaaatcaggcgctggaagccagcgaagtggaa
ccgctcaagcatgaaaccaaaccaccggcgcgctacacggaagcgaccatcgtccgcaag
ctggaaagtgaaggggtcggccgtccgagtacgtatgcttcgatcatcggcaccatccag
gatcgcggctatgtcaaaaagacgggcagtcagctggtacctactttcacagccctggca
gtgacacgtcttctggagaaatttttcccgaacctggtcgatctgcagttcactgctgcc
atggagcaggaactcgatgacatcgctgtcggcgaaggggaccgtttaccttatctgaac
cagttttatcgcggggaagcagggctcgacgaacaggtcaaagccaaggaagagaccatc
gatgcgcgggaaatctgtacgctggacctggaagggatcacctcggcagtgcgcgttggt
cgctatggaccttacgtttccaacgaggcagaagaagaaccggtttcggcatcgattccc
gacaatattgcgccggctgacctgacgaacgaactggcagaaaaattaatccgcctgaaa
gcggaaggccccaaatctctcggcatgcatcccgaggaaaacactcccatttataaactg
catggcccctttggtccttacctgcaactgggtgatgtggtcgaagatggtccgaagccc
aaacgtgtcagtattcctaaaaacgttgatcccgatacgatcgattttgaaaccgcttta
aaatatctgagcctgcctcgtgcactgggcgaacatccggagaccggtaaaaaggtcaac
gcaggcatcggtcgatttggtccatacgtgctgcatgacaaagtctataaatcgctgggt
aaggaagacgacatcctgaccattgatctgcctcgcgcagtggaactgctcaaacaggcg
cgtaaacgcagtgccccgacaccgattcgggatctcgggaaacatccggaagacgaagag
ccgatcggcattttcgatggtcgctacgggccgtacgtgaagcatggcaaaattaacgcg
acgatacccaagggatacgaagtagacaacgtgaccttggatcaggccatggaatggctg
gaagcgaaagcggagaaaaaaggcgtaaagaaggcagctaaaaagaaagcaacagccaag
aagaaatctgcggctaaaaagaccaccaaaaaaacagccgcgaaaaagacaacgaaaaaa
gcagctgcaaaaaagaagactaccaaaaagaaagcggcgaaaaaaacaacaaagaagaag
acagctaaaaaagaagaatctgaagattaa
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