Gimesia maris: GmarT_20550
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Entry
GmarT_20550 CDS
T06180
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_20550 (addA)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GmarT_20550 (addA)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GmarT_20550 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Nse5
Motif
Other DBs
NCBI-ProteinID:
QEG16193
LinkDB
All DBs
Position
2674232..2677747
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AA seq
1171 aa
AA seq
DB search
MSKQPTYTDQQAAAINTRDVSIALSAGAGCGKTFVLTQRFLKLIEPGAPPDRLSHIVAIT
FTERAAREMRDRIRETCLDQLKNCPPEEVNHWQAVIRGLDSARISTIHSFCTSILRSHAV
SARLDPHFGLLEQGTSDTFLRKVVHEAVHELLKQENADCIQMVYRFGLEKTYELLISLVP
QQFRLEFDEFRELTPEQLAGRMRDFWEQNYIPMQLAEIAESDATLHLLRLMNSHEPSNPK
LRQRFQTLKSRIPELIDGAPQMRGELLGTLIDHAKIQGGGTKKDWDDVSIYEQIRDGFKE
LRETLKPVYETLSPDPAGFLAAAEFSLVVLRVSEYAAKCYQESKAEKGLLDFDDLLLQTR
DLFRRDPNARQRAAAGIHYLMVDEFQDTDPVQSEIVRALCGKELLTGKLFLVGDAKQSIY
RFRRADPEVFHQLRQEIPEKGRLPLSTNFRSQPAILNFTNCLFASAMAHYYESLTPFDQQ
QHSPTPGIEFLFASPDDPDIKLADAIRETEADWIAARIRQLLEDETPRIWSKNPQSGERE
LRRVEPGDICILFRSLSSVSLYEKALQEHNLDYYLVGGRAFYAQQEIYDLSNLCQYLDSS
DDELSLLGLLRSPFFSLSDDTIYAITRHAESLTAAMQVAPPDHVRPEQKRQVRYAQAVLQ
ELRTKKDRLSLVELLNLALERTGYDAALLNEFLGDRKLANLRKLIELARNFEASGLFTLK
DFVQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPVVIVADMDRRSQGASKD
PFLHPEWGALLNLPAERGVTPENFAFKMHRAIEQNADEDETVRLLYVAVTRAADYLILSA
GLPYDRRVQSPWMKLLSRHFDLSTGLPTLDPYLGHFTMGNVQQDQIPEIRVHLNRPQTAT
KPAKKIKELKPSQFWAALEQGSPGGYPETFTVFAPQKNRQSHFSVSHLEVADALIQELPE
PQYQRLSTADLLNADEATQLGTLTHSVIERLDPLKPEQSDRIVELVLFDQPQVAGDKLKP
LIQQQIAAWYESEICSALKAARVHYRELEFLLRLPATSDKESAVTVTGMIDAVYQTDDQR
WVVLDYKTGARLAQLADEELISEYEFQLGVYTLAVEQLIGCLPDSVGLAVVHDSVRFVEM
KFDTERLAQISNRLSLAVSHLNQSLVATESS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaacccacttataccgatcaacaggccgctgccatcaatacgcgtgatgtc
tccattgcgctgtcagcaggtgcgggttgtgggaagacgtttgtgttgacacaacggttt
ttaaaactgattgagccgggagccccccccgaccgactcagccatatcgtcgcgattacg
tttacggaacgtgcggcccgggaaatgcgggaccggattcgtgaaacctgtctggatcag
ttgaagaactgtccgccggaagaagtgaatcactggcaggcggtgattcgcggtctggat
tcggcacggatcagtacgattcattctttttgtacttcaattctgcggagccatgccgtc
agtgcccggcttgatccgcattttggtctgctggagcaggggaccagtgacacatttttg
cggaaggtcgtgcatgaagcagtccatgaactgctgaaacaggaaaatgccgattgcatc
cagatggtatatcgctttggtctggagaaaacctatgaactgttgatttccctggttccc
cagcagtttcgtcttgaatttgatgagttccgcgaactgactccagaacagctggcggga
cggatgcgcgatttctgggaacaaaattatatacctatgcaacttgcggagattgctgag
tcagacgcgacgctgcatttattaaggctgatgaattcgcatgaaccgagcaatccgaaa
ctgcgtcaacggtttcagacgctcaaatcacgtattcctgagctgatagacggcgctcct
cagatgcgaggtgaattactgggcacactgatagatcatgccaaaattcaagggggaggc
accaaaaaggactgggatgatgtcagcatttatgagcagatccgtgacggattcaaagaa
ttacgtgaaacattgaaaccagtttatgaaacactgtctcccgatcctgctggattcctc
gcggcggcagaattcagtctggtggtgttaagagtgtctgaatatgccgcgaaatgctac
caggagagtaaagcagaaaaagggctgttggactttgatgatctgttgctgcagactcgg
gatctgttccgccgcgatccaaatgcccgacaaagggctgctgccggcattcattatctg
atggtagatgagtttcaggataccgatcctgtacagagtgaaattgttcgcgcgttgtgc
gggaaagaacttttaaccgggaaactgtttctggtgggggatgccaagcaatccatttat
cggttccgaagggccgacccggaagtatttcatcagctccgacaggagattccagaaaag
gggcggcttccgttaagtaccaattttcgaagccaacccgcgatactgaattttacgaac
tgtctgtttgcgtcagcgatggcacattattacgaatcgttgacgccgttcgaccagcaa
cagcactcacccacgccgggcattgaattcctgtttgcctcgcctgatgacccggatatc
aagctggccgacgcaatccgtgaaaccgaagcagactggattgcggctcggattcgtcaa
ttgctcgaagatgagactccccgcatctggtccaaaaatccgcagagcggcgaacgcgaa
ttgaggcgggtggaacccggagatatctgcattctgtttcgttcactgtcgagtgtcagc
ctgtatgaaaaagcattgcaggagcataatctggattattatctcgtagggggtcgtgct
ttttacgcacaacaggaaatttacgatctgagtaatctatgtcagtacctggatagcagc
gatgatgagttaagcctgctgggactgttgcgttcaccgttcttcagtctgtctgatgat
acgatttatgccatcacacgccacgcagaaagcctgacggcagcaatgcaggtcgccccg
ccagatcatgtgcgtcccgagcagaaacgccaggtacgctatgcccaggctgtacttcaa
gagctgcggacaaaaaaagaccgattgtctctggttgagttattaaatctggctctggag
cgaaccggttatgacgcggctttgctcaatgaatttctgggtgaccgcaaactggccaac
ctgagaaaactgattgagctggctcgcaatttcgaagcatcgggcctgtttactctgaag
gattttgtccagcgaattcgggattcgattctggaagagagtaaggaagagctggcggcg
actttacctgaaaccagcgacgtcattcgtctgatgaccatccatcagtccaaagggctg
gaattcccagtcgtgattgttgccgacatggatcgccgctcacagggagcttctaaggat
ccatttctgcatccggaatggggggcactcctgaatttgccagcagagcggggggtaact
ccggagaacttcgcatttaaaatgcatcgtgcgatcgagcagaacgccgatgaagacgag
actgtcagactgttgtacgttgcagtgacccgcgcagcagattacctgatcctctctgcc
ggattgccctatgatcgcagggtacagtccccatggatgaaactgctgtcgcggcacttt
gatctttcaacggggttgccgactttggatccttatctgggtcattttaccatgggaaat
gttcaacaagatcagattccggaaattcgcgtgcatctgaatcgacctcaaactgcaacg
aaaccagcgaagaaaattaaagagctgaaacccagtcagttctgggcagcacttgaacag
ggatctccaggaggttatccggagacatttaccgtcttcgcccctcaaaaaaacaggcaa
tcccatttcagcgtttcacatctggaagtggctgatgccttaatacaagagttgcctgaa
ccacaataccagaggctgtcgacagcagatctgttgaatgctgatgaggcgacccaactg
gggacattaacacactctgtgatagaacggctggatccactaaagcctgaacagtcagac
cggattgtggaactcgtcctgttcgatcaaccccaggtcgctggagataaactgaaaccg
ttgattcagcagcagattgctgcctggtatgaatcggagatctgtagtgcgttgaaagcg
gcacgcgttcattatcgggaactggaatttctgctacgcttgccagcgacttctgacaaa
gagtctgctgtgacagtaaccggcatgattgatgccgtttatcagacggacgatcagcgc
tgggttgtcctcgattacaaaaccggtgcacgcctggctcaactggcagatgaagaactg
atctcagagtatgaatttcagttgggagtctatacactggcggtcgaacagctcattggc
tgtctgcctgactctgtcggcctggcagtggtccatgattcggttcgatttgtagaaatg
aagtttgatacagagcgacttgctcagatttcaaatcggctttccctggcggtttctcac
ctcaatcaatctctcgtggcgacagaaagtagttaa
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