Gimesia maris: GmarT_24920
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Entry
GmarT_24920 CDS
T06180
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gmr
Gimesia maris
Pathway
gmr00521
Streptomycin biosynthesis
gmr00523
Polyketide sugar unit biosynthesis
gmr00525
Acarbose and validamycin biosynthesis
gmr00541
Biosynthesis of various nucleotide sugars
gmr01100
Metabolic pathways
gmr01110
Biosynthesis of secondary metabolites
gmr01250
Biosynthesis of nucleotide sugars
Module
gmr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GmarT_24920 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GmarT_24920 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
GmarT_24920 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GmarT_24920 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
GmarT_24920 (rfbB_2)
Enzymes [BR:
gmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GmarT_24920 (rfbB_2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
QEG16626
LinkDB
All DBs
Position
complement(3223152..3224174)
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AA seq
340 aa
AA seq
DB search
MKQILVTGGCGFIGSNFIRYQLSEYPDISVTNLDKLTYAGNLENLKEFENHSGYTFVKGD
ITDADFVNSLLNSTDFDAVINFAAESHVDRSILDSGPFIHTNIVGTQILLDAARNKNIAR
YVQVSTDEVYGSLGAEGLFTESTPIAPNSPYSASKASADLLVRSYIKTFDFPAIITRCSN
NYGPYQFPEKLIPLFISNALEDKSLPIYGEGTNVRDWIHVIDHCRGIDAALRKGKTGQIY
NFGGNAEMQNIEITRLLLNILDKPESLIKYVTDRPGHDLRYAIDCSKAEAELGWKPETRF
DTGLKDTVQWYLDNPEWVNRIRSGQYMNYYEQQYGNRLNT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagattttagtgactggaggctgtggatttatcggatccaatttcattcgatac
caactctcagaatacccggatatttcagtaaccaatctcgacaagttaacctatgccggc
aatctggaaaacctgaaagaatttgaaaaccattcaggatatacctttgttaaaggtgat
atcacagacgccgattttgtgaactctctcttgaattccaccgatttcgatgccgtgatt
aatttcgctgccgagtcgcatgtcgatcgcagtattcttgattcgggtccctttattcat
acgaatattgtggggactcaaattctgctggatgcagcccgcaataagaatatcgctcga
tatgtgcaagtctcaacggatgaggtttatggcagcctgggtgctgagggattattcacg
gaatcaactccgattgctcccaacagcccgtattctgcctcgaaagcctctgccgacctc
ttagtaagaagttacattaaaactttcgacttccccgccattatcacccgctgttccaac
aactatggtccctaccagtttccagaaaaactgatcccgctattcatctcgaatgctctg
gaagataaatcactgcctatttatggtgaaggaacaaatgtcagagactggattcatgtc
attgaccattgtcgtgggattgatgccgctttgagaaaagggaaaaccggtcaaatctac
aacttcggtgggaatgcagagatgcagaatatcgaaatcaccagactgttattgaatatt
ctcgataagccagagtctctgatcaaatatgtcacagacagaccaggacatgacctacgc
tatgcaattgactgcagcaaagcagaagcagaattaggctggaaacctgaaaccagattt
gatactggattaaaagatacggtacagtggtatctggacaacccggaatgggtcaatcga
atccgttcgggacaatatatgaattattatgagcagcagtacggcaaccgcttaaatact
taa
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