Gimesia maris: GmarT_26810
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Entry
GmarT_26810 CDS
T06180
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gmr
Gimesia maris
Pathway
gmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GmarT_26810 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmr03019
]
GmarT_26810 (recQ)
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_26810 (recQ)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GmarT_26810 (recQ)
Messenger RNA biogenesis [BR:
gmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GmarT_26810 (recQ)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GmarT_26810 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEG16813
LinkDB
All DBs
Position
complement(3488496..3490331)
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AA seq
611 aa
AA seq
DB search
MTRAGMDDALLDVLHEYWGYAEFRPLQQEAMTAVLDDRDSLVVLPTGGGKSLCYQAPALC
REGTAVVVSPLISLMKDQVDALRVCGISAACLNSSLDQEESRQVLRDVRAGKIKLLYVAP
ERLMLENMLCLLAEINLTYIVIDEAHCVSMWGHDFRPHYRELSELKNIFPQCGIHAYTAT
ATEEVRSDIAVQLGLKTPEILIGSFDRPNLTYSVARRADRFNQVCAVLDRHPGEPGVIYC
ISRADVESLSESLNDAGYETRPYHAGLEDRERAANQEAFIQDRVDVIVATIAFGMGIDKP
NVRYVIHAGLPKSLENYQQESGRAGRDGLEAECVLLYSEQDAMIWKRILEDQPDESKASA
LQSLQAMQNYCHAFDCRHRYLMQHFGQDLEQDCETGCDLCRGDFQKVEDAQVIGQKILSS
IFRQDQNFGASYTAAVLKGSKDKKVLANGHDKLSTYGLLKTESLATIRHWINQLVSQGYL
TKTAEYQQLRITKTGRQLLKGEITPQLMRTTETSKSETNRAPKNDLSQLNWKGVDQDLFE
SLRLLRKQIAGEKGIQPYMVFGDATLRELARHKPQTLPQFLEIWGVGQKKCDDFGQQFLD
CIATQSDQTSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgctggaatggatgacgctttactggatgtgctgcacgaatactggggctac
gcggagttccgtcctctgcagcaggaagccatgaccgctgtcctggacgaccgggattcg
ttggtcgtactcccgacaggcggaggaaaatcgctctgctaccaggctcctgcactctgc
agggaagggacggccgtcgtagtcagccccctgatctcgctgatgaaagatcaggtcgat
gcacttcgcgtatgtggtatctccgcagcctgcctcaacagttccctggaccaggaagaa
tcgcgtcaggtcctgcgcgatgtccgggccggcaagatcaaactcctgtatgtcgccccc
gaacggctgatgctcgaaaacatgctctgcctgctggcagagatcaacctgacttatatt
gtcatcgacgaagcacactgcgtcagcatgtggggacacgactttcgcccgcattatcgt
gaactgtctgaattgaaaaacatcttcccccagtgtggcattcatgcttatacagcaact
gcgactgaagaagttcgctccgatatcgccgtacaactggggttaaaaactcccgaaatc
ctgatcggttccttcgatcgtcctaacctgacttactccgtcgcacgacgcgctgaccgc
ttcaatcaggtctgcgcggtactggatcgtcatcccggagaacccggtgtgatctactgt
atttcccgcgccgatgtggaatcgttgagtgaatctctgaacgacgccggttatgaaaca
cgcccctaccacgcggggttagaggatagagaacgggccgccaatcaggaagcctttatt
caggaccgggtcgatgttatcgtcgccacgattgcattcggcatgggaatcgacaagccc
aacgtgcgctatgtgattcatgccggcttacccaagtctctggaaaactatcagcaggaa
agtggtcgggcagggcgggatggcctggaagcagagtgcgttctgctctattcggaacag
gacgcgatgatctggaagcggatcctggaagaccagcctgatgaatcaaaggcaagcgct
ctgcaatcgctgcaggccatgcagaattactgtcatgcatttgactgtcggcaccgttac
ctgatgcagcacttcggacaggacctggaacaggactgcgaaaccggctgcgatctctgt
cgtggtgactttcagaaagtcgaagacgcccaggtcatcggacaaaaaatcctgtcatcc
attttcagacaggatcagaattttggggcttcctacaccgctgccgtcctgaaaggctcg
aaagataaaaaagtactggcaaacggacatgacaagttgagcacttacggtttgcttaaa
actgaaagccttgcgacaattcgacattggatcaaccagctggtctcccagggatatctg
acaaagacggcggagtatcagcaactgcgcattaccaaaaccggcaggcaactgctgaaa
ggcgaaatcactccgcagctgatgcgaacgacagagaccagcaaatcagagacaaatcgt
gctccaaagaacgatttatcccaactaaactggaaaggtgtcgaccaggatctcttcgaa
agcctgcgcttactgcgtaagcagatcgccggggagaaagggattcaaccgtatatggtc
ttcggcgatgccacgctcagagaactggcacgacacaagcctcaaacactacctcagttc
ctggaaatctggggggtaggccagaaaaaatgtgatgacttcggtcagcagtttctggac
tgcattgcgacccaatctgaccagacttcctcgtaa
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