Gimesia maris: GmarT_30650
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Entry
GmarT_30650 CDS
T06180
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gmr
Gimesia maris
Pathway
gmr03410
Base excision repair
gmr03430
Mismatch repair
gmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GmarT_30650 (recJ)
03430 Mismatch repair
GmarT_30650 (recJ)
03440 Homologous recombination
GmarT_30650 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_30650 (recJ)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GmarT_30650 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GmarT_30650 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GmarT_30650 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEG17187
UniProt:
A0ABX5YNP9
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All DBs
Position
complement(3969323..3971086)
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AA seq
587 aa
AA seq
DB search
MTQNWRFAPHDESQVRRLSSEMRISPLLAQVLIARGLQDAAAARSFIDARMTELLEPGSM
PGVETASDRIVAALKDKRRITIYGDYDVDGMTATSILLQCITLANGKCDYFIPNRLDDGY
GLNCDAIRQLHEEDPQRLLITVDCGITSVQEAALARELGLELIITDHHQMADELPAADCL
VHPRLPDSDYEFPHLCGAGVALKLAWAVCQKLGDGQKASPQMREYLKCAVGLAAIGTIAD
VVPLVGENRILVRYGLSALAERAPLGLQELMKVAEIKAGQMLDTEDIGFAIAPRLNAAGR
LGQARLAVELLTTSNQDRASQLAAYLDELNKNRRTVERRIFKQAKEMVEENAEWEEHHTL
VLAHADWHPGVIGIVANRVSEHFEKPTVLIALDATTRTGQGSARSFAGFDLHAGFSSCSA
HLVRYGGHQAAAGLKIEEDKIENFRQAFAEYAADAPKPSEDELLVRIDAEVCLNEITKQA
VRELDCLGPFGQENPRPQFVATRVQLAEPPRTMGEGGRHLSLVFQQHNTKIRAIAFGKGE
WATQMDEDGGPFSISFAPGINRFRGFESVQLQLKDWVSEKSEASIPS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaactggcgttttgccccccatgatgaatcacaggtacgccgcctcagttct
gaaatgcgaatctcgcccttactggcgcaggtcttgattgcccgaggacttcaggacgct
gccgctgcgcgaagctttattgatgcccggatgaccgagttgctggaacccggttccatg
cctggcgtcgaaaccgcctcggatcgaattgtcgccgcgctcaaagacaaacgtcgcatc
accatctatggcgattatgatgtagacggaatgacggcaaccagcattcttctgcaatgc
atcacgctggcaaatggaaagtgtgactacttcattcccaaccgactcgatgatggatat
ggcttaaactgtgacgcgattcgacagttgcacgaggaagacccgcagcgattgctgatc
acggtcgactgtggaattaccagtgtgcaggaagctgctctggctcgggaactgggcctg
gaactgattattaccgatcaccatcagatggcggatgaattaccggcagcagactgcctg
gtccatccgcgacttcctgacagtgattacgagttcccccatctttgcggagctggtgtg
gctttaaaactggcgtgggcggtctgtcagaaactgggagatggtcagaaagcatcgccg
cagatgcgagaatatctcaagtgtgccgtcggactggcggccatcggtacgatcgctgat
gtcgtgcctttggtgggcgagaaccggatcctggtccgctacgggctgagtgcactggca
gaacgggcgccgctgggattacaggaattgatgaaagttgcagaaatcaaagcggggcag
atgctggatacagaagacatcgggttcgcgatcgcacctcgtctgaatgccgccggtcgc
ctgggacaggcccgcctggcagtcgaactgttgaccaccagtaaccaggatcgtgcctct
cagttggctgcgtatcttgatgaactcaataaaaatcgccggacggtagaacgacgcatt
ttcaaacaggccaaggaaatggtcgaagaaaatgcggaatgggaagagcatcacacgctg
gtacttgcgcatgcagactggcatcccggagtcattggtattgttgcgaatcgggtttcg
gagcattttgaaaaaccgacagtattgatagccctggatgcgaccacacgcaccgggcaa
ggttccgcacgatcttttgccggatttgatctccatgcaggtttttcctcgtgttcggca
catctggtccgctatggtggtcaccaggctgcagcaggcctcaaaattgaagaagataaa
atcgaaaattttcggcaggcatttgcagaatatgcggccgatgcgcctaagccttccgaa
gacgaactgctcgtccgcattgatgcggaagtctgtctgaatgaaattaccaaacaggcg
gtacgtgaactggattgcctgggtccctttggccaggagaacccgcgacctcaatttgtg
gcaacacgcgtgcaactggctgaaccgccacgtacgatgggggaaggcggccgccatctt
tcactcgtcttccagcagcataataccaaaatacgtgccattgccttcggaaaaggggaa
tgggccactcaaatggatgaagatggcgggccgttttcaatcagctttgcccctggcatt
aatcgttttcgcggtttcgaaagtgtgcagcttcagttgaaagactgggtttcggaaaag
tcagaagcctctattccatcctga
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