Gimesia maris: GmarT_35220
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Entry
GmarT_35220 CDS
T06180
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmr03016
]
GmarT_35220 (truB)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GmarT_35220 (truB)
Transfer RNA biogenesis [BR:
gmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GmarT_35220 (truB)
Prokaryotic type
GmarT_35220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEG17640
LinkDB
All DBs
Position
4644670..4645602
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AA seq
310 aa
AA seq
DB search
MSSKKSGADLKISGLLNINKPQDITSRQVVDQVQKLIKPARVGHAGTLDPLATGVLVLCT
GSNTRLIRLVQQQPKEYIGEFLLGKRSDTDDITGEISETADCRQVTLPELETCLPAFEGR
IQQIPPQYSAVHINGRRAYDLARRGKSFEIQPREVDVYEIELLDFSFPRFQLRIVCGSGT
YIRSIGRDLGEQLGVGATMSALTRTRIGPFTLDSAMELDEELSLGTIADNIQPAILAVEQ
LPHYHCNERELLSLSQGQKLKCKPEYFPATHEIIEVAVISPQTELVAIADWEPEAHQLSP
RQVFHPAPNN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaaaaatctggcgcagatttgaaaatatcgggtctgctgaatatcaataaa
ccacaggacatcacttcgcggcaggttgtcgatcaggtccagaagctgattaaaccagcc
cgagtgggtcatgcgggaaccctggatccactcgcgacgggggtactggttctgtgtact
ggttcgaacacgcggttgattcgccttgtccagcagcaaccgaaagaatatatcggtgaa
tttcttctgggaaaacgcagtgatactgatgacatcactggtgaaatcagcgagacagct
gactgtcgacaggtaactctgccggagttggaaacctgtctgcctgcattcgagggaagg
attcaacagattccgccccagtattccgccgttcatattaacggtcgccgggcttacgat
ctggcacgacgtggtaaatcgtttgaaattcaaccccgtgaagttgatgtttacgaaatc
gaattactggacttttcatttccccggtttcaattgcgcatcgtgtgtggctcgggaacc
tatattcgttccattggtcgcgacctgggcgaacaattaggggtgggtgccacgatgtcg
gcactgacgcgtacccgtattggccccttcacactggattcagcaatggaactggatgaa
gaactttctctcggcacgattgctgacaatatacaaccggcgatactcgctgtggaacaa
ctgccacactaccactgcaatgaacgggaactcctctcactcagccagggacaaaagttg
aaatgtaaaccagaatattttccagcaacacacgagatcattgaagtggctgtgatcagc
cctcagaccgaactggtagcaattgccgactgggagccggaagcgcatcagttgtcccca
cggcaggttttccaccccgcacctaataattag
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