Gimesia maris: GmarT_36520
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Entry
GmarT_36520 CDS
T06180
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmr03016
]
GmarT_36520 (truA)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GmarT_36520 (truA)
Transfer RNA biogenesis [BR:
gmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GmarT_36520 (truA)
Prokaryotic type
GmarT_36520 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QEG17770
LinkDB
All DBs
Position
complement(4808464..4809267)
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AA seq
267 aa
AA seq
DB search
MRNIKLTLAYDGSEYAGWQVQPNGPSVQACVEKAIEQLTQQRSPVLVAGRTDAGVHALGQ
VASFQTESAIPCKNLQTGLQRFLPESICVREVREVPPDFHATYSAIQKRYRYVIHNSAVP
YPFLKKYVSEFGRPLDSDRMHAAGQQLLGQHDFRCFESHYPNKATSVRTITELTVQRTGV
WPVWGVLEQAHLSMENSTSAEFITVDVVADGFLYNMVRAIVGTLLDVGVGRWTSNDVQKI
LTGMDRSQAGPTAPACGLYLVQVDYPE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaattgaccttggcctatgatggatcggaatatgctgggtggcaggtg
caacccaatgggccgtccgtccaggcctgtgtggaaaaagcgattgaacagcttacgcag
cagcgcagtccggtgctggtcgcaggtcgtactgatgccggcgtgcacgcgttaggtcag
gtggccagttttcagacggaatcagccattccctgtaagaatctgcaaacaggattacag
cggtttctgccagagagcatctgtgtgcgcgaagtacgggaagtaccgccggactttcat
gctacctattccgcgattcagaaacggtatcggtatgtgattcacaattcagcggttccc
tatccgttcctgaaaaaatatgtgagcgagttcggtcgtcctctggactcagaccgcatg
catgccgccggtcagcagctgctgggccaacatgatttccgctgtttcgaatcgcattat
cccaataaagcaaccagcgtgcggacgattacagaactgactgtgcagcggaccggggtc
tggcctgtgtggggagtattagaacaggcgcatctttcgatggagaattctacttcagcg
gagttcattaccgtcgatgttgttgctgacggatttttgtacaatatggtgcgcgcgatt
gtaggtacgctgctggacgtaggcgttggtcgctggacctcaaacgatgtacagaaaatt
ctgaccggaatggaccgttcacaggccgggccaacagcgccggcctgtggtttgtacctg
gtacaggttgactatccggaatga
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