Gimesia maris: GmarT_43750
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Entry
GmarT_43750 CDS
T06180
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gmr
Gimesia maris
Pathway
gmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GmarT_43750 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_43750 (mutM)
Enzymes [BR:
gmr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GmarT_43750 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GmarT_43750 (mutM)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GmarT_43750 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QEG18486
LinkDB
All DBs
Position
complement(5685746..5686567)
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AA seq
273 aa
AA seq
DB search
MVRGIREAVEGRKIKDFRNCPCPCKPISMKPGIKSIRTKALNQTVTSVRRRAKRVILDLE
NGYSFVIEPRMTGLMLLSDPPDTGHLRLEWTLQKGRSSRSLWFWDRRGLGTVQLLSRKEQ
ELVLGPQKLGPDALEITANELKQRLAKTSRAIKVALLDQKMVAGIGNLYASEMLHQSRIH
PERTADQLSTAEIRSLHKAMQQILKTAIRYEGSTLGDGTYRNALNQSGGYQNQHQVYGQE
EKNCPSCKGAQIVRIVQAQRSTFFCPCCQIIPS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcggcatccgcgaggccgtggaaggccgcaaaataaaagactttcgaaattgt
ccctgcccgtgtaagcccatttccatgaagccaggcattaaatccattcgaacaaaagct
ttaaatcaaactgtaaccagcgtcagacgtcgggcaaaacgggtgatcctggatctggag
aatgggtattcgttcgtcattgaaccccgtatgactggactgatgttactgtctgatccc
cctgataccggtcatctgcgtctggagtggactttgcagaaaggacggtccagccgatca
ctctggttctgggatcgccgtggcctgggcacggttcaactgctcagtcggaaggaacag
gaactggtcctcggaccgcagaaactgggacccgatgcacttgagattacagccaatgaa
ttgaaacagcgcttggcgaaaaccagtcgtgccatcaaagtcgccttgctggatcaaaaa
atggtcgctggaatcggtaatctgtatgccagtgaaatgctccatcagagtcgtattcat
cctgaacggaccgccgatcaattatcgacggcagaaatcagatcgctgcacaaagccatg
cagcagattctgaaaacagcgattcgctatgaaggatccacactcggcgatggaacctat
cggaatgctctcaatcagtcgggaggctatcagaatcaacatcaggtgtatggtcaggaa
gaaaaaaactgtccgtcctgcaagggagcacagattgtcaggattgtccaggcccagcga
tctacgtttttctgtccttgttgtcagatcataccgtcgtaa
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