Gimesia maris: GmarT_47080
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Entry
GmarT_47080 CDS
T06180
Symbol
sdsA
Name
(GenBank) All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific)
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gmr
Gimesia maris
Pathway
gmr00900
Terpenoid backbone biosynthesis
gmr01100
Metabolic pathways
gmr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GmarT_47080 (sdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gmr01006
]
GmarT_47080 (sdsA)
Enzymes [BR:
gmr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GmarT_47080 (sdsA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GmarT_47080 (sdsA)
2.5.1.29 geranylgeranyl diphosphate synthase
GmarT_47080 (sdsA)
Prenyltransferases [BR:
gmr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GmarT_47080 (sdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF116
GalP_UDP_tr_C
Motif
Other DBs
NCBI-ProteinID:
QEG18815
LinkDB
All DBs
Position
complement(6143860..6145695)
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AA seq
611 aa
AA seq
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MSIAPLDQESSEDKIVPGSSKAEVRSSDNKKPVKRKRQSTSHLKAVPETSALREEMKAEA
EKFVEKLDCSNPFNKTTLEAWSRELLEHMNQPEKFLGFMMVLIGNFFWKRQFLAIPFERR
LLLLPHCLKHAEGCPAEYDEFGLDCEKCGACSIADYKVRAEQLGYKVLVAEGSPVVLKII
VGGYVDGILGVACLNVLEKSIDKVLIAGVPSYAVPLHSGDCKNTKMDEPWIWEVLEEYRP
LEQPLTRSYLPTMRAANALFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKR
FRPFITLAAYDALIKAQQADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRYG
RETLHRQHGTGMAINIGDYLIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCEGQGA
EMAWQESETFELAPLDALQIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRHIGVG
FQILNDLKDWQGDDNNKLISGQDALAMRPTLLLALALQTADDQQKADLKDILQGHPSDGA
RIGRLRQIYQDCDVFNKAEALVDKSRARAEELAENVENEDFKQLLMFFCDTVLAEETPEA
KPEPQVLMPTA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgtccattgcacctttagaccaggaaagttctgaagataaaattgtacccggctcaagc
aaagctgaagtacgctcttccgataacaaaaaaccggtcaaaagaaaacgccagagtacc
agtcatctgaaagcggtaccggaaacctctgcgctgcgcgaagaaatgaaggccgaagcg
gaaaagttcgtcgagaagctcgactgttccaatcccttcaacaaaacgacgctggaagcc
tggtcgcgtgaattgctggagcatatgaatcagcccgaaaagtttctgggcttcatgatg
gtcctgatcgggaactttttctggaaacggcagttcctggcaattcccttcgaacgccgc
ctcctgctgttgcctcactgcctgaagcacgccgaaggctgtcctgcagaatacgatgag
tttggtctcgattgtgaaaagtgcggcgcgtgttcgatcgccgactacaaagtcagagcc
gaacagttgggatacaaagtactcgttgccgagggctcacccgttgtcctcaaaatcatc
gtcggcggttacgtggacggcatcctgggagtcgcctgtctgaacgtcctggaaaaatcg
attgataaagtgctcatcgccggcgttccgtcctatgcggttcccctgcattccggcgac
tgtaaaaatacgaaaatggatgaaccctggatctgggaagtcctggaagaataccgtcct
ctggaacagccgctgacacgcagctatctgcccaccatgcgggccgccaatgcactgttt
gaagataacttcgatcagattctacctccgctgcgtacaaaaaccgaagccgccgcccgg
actccactgggtaagacagaagccatttcctacgactggctcaagcatggcggaaaacgg
ttccgtccctttatcactctggccgcttacgatgcactcatcaaagcacaacaggcggat
gacacagcagagaccacctatcccctgggcgtgcagaaagccgccatggccattgaagtc
ttccataaggcttcactgattcacgatgacatcgaagacgatgaccagtaccgatacggt
cgtgaaaccctgcatcgtcagcatggcaccggcatggccattaatatcggcgactacctg
atcggtgtcgggtatcgcctgctcaacgaagcccgggccgatatcggcgctgaagctgct
tccgacctgatcgaaaaaatgtccgctgcccatatccgactctgcgaagggcagggggcc
gagatggcctggcaggaaagcgaaaccttcgaactggcaccgcttgatgcattacagatc
tatgcactcaaaacatcaccggctttcgaagcggctctctacgccggcattcgcatgacc
ggttcggtgggcgagtacgaagaactgatctcttccttctcaaggcatatcggcgttggg
ttccagatcctgaatgacctcaaagactggcagggagacgacaataacaagctgatctcc
ggacaggatgccctggcgatgcgaccgacgctgctgttggcactggcactccagaccgcc
gacgatcagcagaaggccgacctgaaagacattctgcagggacatcccagcgatggggct
cgcatcggtcgtctgcgtcaaatctatcaggactgcgatgtctttaacaaagccgaagcc
ctggtcgataaatcacgggcccgggccgaggaactggcggaaaacgtcgagaacgaagac
ttcaaacaactgctgatgttcttctgcgataccgtgctggccgaagaaactcccgaagcc
aaaccggaaccccaggtgttgatgccgactgcctga
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