Gimesia maris: GmarT_47600
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Entry
GmarT_47600 CDS
T06180
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
gmr
Gimesia maris
Pathway
gmr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GmarT_47600 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmr03021
]
GmarT_47600 (sigA_2)
Transcription machinery [BR:
gmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GmarT_47600 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
QEG18866
UniProt:
A0A3D3RE72
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All DBs
Position
complement(6213434..6215200)
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AA seq
588 aa
AA seq
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MHRFDANLNLLFQEAEKQGFLTFQQVHTFLPDEGGDPSLIEYIVVGLEERGLDLIDDPNA
DIDDEEVASVDSSANTHSDVAQGADEDSDDASSSIVEPETSLSSRDPIRMYLSQMGNIPL
LSRSREIFLAKKIEITRKRFRRTVLESDFALKIAIDTLEKVFAGELPFERTLRTSDTEDA
TKDQIMGRMPYNIATLKALLQKNNEDFELIQSGELGKVEQREVQKRMVVRRQKMATLCEE
LCLRTQRLQPVLKRIHQIAGRMREVQEQLEDYKQLRHKATDHRLLERELSELTIMVVETS
EDFQTRSREIKRRFDDWTEAKQQLSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNAGLMRG
VEKYEYRRGYKFSTYATWWIRQAITRAVADHARTIRIPVHMFQSISTLKARSEQIRQETG
REPTMEELADSVGLGVEETERIMKTWKHPISLDTPVGESEDSSFGDFLEDGHESSPADAA
MREMLKDKIEHVLKSLTYREREIIRLRYGLGDGYSYTLEETGRIFKVTRERIRQIESKAL
RKLQHQTRSAHLRGFVDAIFPNKEDEENEGEEGVQTDQESSTMVGALE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgtttcgatgcaaatctgaacttactatttcaggaagcggaaaaacaaggtttt
ttaacatttcaacaggttcatacgttcctcccagacgaaggaggcgatccctcgctgatt
gaatatattgtcgtgggactggaagagcgtggccttgatctgattgatgatccgaatgcg
gatattgatgatgaggaagttgcttccgtcgactcctcagcgaacacccactcggatgta
gctcagggggcagatgaagattcagatgatgcttcttcctccattgttgaacccgaaaca
tcgctctcttcgcgtgatcccattcgcatgtatctcagtcagatgggaaatatcccactg
ttgagtcgttctcgcgaaatttttctggccaagaagattgaaatcacgcgtaaacgattt
cgccgcactgtgctggaatctgatttcgcactcaagattgccatcgacactctggagaaa
gtgttcgcaggagagcttccttttgagcgaaccttacgcacctctgataccgaagatgcc
accaaagatcagattatggggcggatgccttataatatcgcaaccttaaaggcactcctc
cagaaaaacaatgaggattttgagctgattcagtctggtgaacttggtaaggttgagcag
cgtgaagttcaaaagcggatggtggtacgtcgccagaaaatggcaaccctctgtgaagaa
ctctgtctgcgtacgcaacgtctgcagccggttctgaaacgaattcatcagattgccggt
cggatgcgtgaggttcaggaacagcttgaagattataagcagctgcgtcataaggccacc
gatcaccgtctgctggaacgcgaactgtctgagttgaccatcatggtggtcgaaacatca
gaagattttcagacccgttcccgggaaatcaaacgtcgttttgatgactggaccgaagcc
aagcagcaactctctggcggaaacctgcgtctggttgtctcgattgctaaaaaataccga
aatcgtggcttaagcttcctggacctgattcaggaaggaaacgccggcctgatgcgtggt
gtggaaaaatatgaatatcgccgtggttataagttttcaacctatgctacctggtggata
cgtcaggccattacccgcgctgtcgccgaccatgcccggaccattcgaattcccgtgcac
atgttccagagtatctctactctgaaagcgcgcagcgaacagattcgccaggaaaccggt
cgtgaaccgacgatggaagaactggccgattccgttggtcttggtgtggaagagaccgaa
cggatcatgaagacctggaaacatcccatcagcctggatacgcctgtgggagaaagtgaa
gacagcagcttcggtgatttcctggaagatggacacgaatcctctcctgcagacgctgcc
atgcgtgaaatgctgaaagacaaaattgagcatgttctcaaaagcctgacataccgtgaa
cgtgaaatcatccgtctgcgatatggcttaggtgatggctacagttatacattggaagaa
accggtcgtatcttcaaagtaacccgcgagcgaattcgccagatcgaatccaaggcgctg
cgaaaactgcagcatcagacacgcagtgcccatctgcgaggctttgtcgatgccatcttc
ccgaacaaggaagatgaggaaaacgaaggtgaagagggcgtgcagacagatcaggagtct
tccaccatggtgggggcacttgagtag
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