Gimesia maris: GmarT_48620
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Entry
GmarT_48620 CDS
T06180
Name
(GenBank) outer membrane porin HofQ
Organism
gmr
Gimesia maris
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Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
STN
NPF
TPR_2
TPR_4
DSE-like_N
Secretin_N
TPR_1
SSNA1
Motif
Other DBs
NCBI-ProteinID:
QEG18966
UniProt:
A0ABX5YTG6
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Position
complement(6323176..6328245)
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AA seq
1689 aa
AA seq
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MMTPQKKHNHSWCSGLKEGPTLGKAFGVLACTTLIAASMWLANLGNTTRKVAADVENNGQ
PVSGRQLRSARYYLSLGTQYYERGQYAEAVEVLEKASVSPGRLSSAEFRKMNEYLGRART
RAAAPREKQIVRAQSPASDTEYTTNFSSHTGKSPEEQKQLARQLLQSAREDLKLNELAKA
RQKAGQAAAMRLEYGPFEERPEQVLAAIARAEQRMQKNAPIQQAGGFASQNSQVMQVAGI
EEPAGSNPFSPSAANPFDGSQDRKLTEKEQAAVLLKQARQSLNSGNYDDARTLALQAQDY
DVAYKLFEERPQHILSEIERKTGTKIFAGKSEPEQPVAQSSAGSSEKDQAARLLKQARAE
LQSGRLDSARALAQQASQLDVAYRLFDDRPELVLDEIKRAQSGAGSLAATGNTGSAQMTA
AEGASKEQATELLRQARLDIKKRDFAGARQKVQQVQGMKVSYDLFDDRPELVLAAIDRIS
DEAATISGIKGLQQNQDAIRPRINRLMEQAQVALQQGNKDEALMLASSAQKLAETLNIEF
ASTSESPSAFIKRVGTSSASKFNPGNTASEKNNPEYARKLVAAARNDLAQGRIEDARQKA
EAAQQVDTAYSLFEDRPEQVLADIRNMAGQPGGLSQEQLYAAENERKKQFSQKLVAQART
DLKAGRIDSARVNAQEALRVGVEFKPGEDSPQSILRDLESRTAAQQPERVARMKKSEASE
IAVIHPGASALELYNLGMQRLSEGNREAAYQSFLAAYQSGEKLDNHRAQQLQDAVRELAP
SRADKIRLVKNQTSSDDPANGSQEPSTIDLVQQKQAIEFSRLRSDVLNAIFKAERMRESA
PTDALSIIDQTMSKVESSSLDKKSTATLIGSLQRTRESIDSFRKQVAPLEELKKQNQEVE
EYIDARIKNKIRVEQELADLVEKFNELVDQRRYAEAEVIAKQAKDLDPQNPVTVTMEWKA
KFLRRDASNNAMRDRKEQNVWNQLNDVEESLADAYTPDIKFGHDAKEWAELTKRRDKYHV
KNHNQKTERELQIEESLDRPVNLQFEGEPLTNVMSKIQTLTGINIFLDSLGLEEEGVTPS
APVTINVNGIKLRSALNLLLEPLNLSYTIDNEVLKITSRIRQQGTLKTQTYPVADLVVPI
PNFAASGNMAANPYSQMGAISYGSGIGGNQAAPGNFQVADPVMGGVPGSNPWNNNGATSQ
VAGGGSNIDFDSLTELIVSTVEPDSWEEIGGAGSVRPFETTLSLVIRQTQKVHDEIANLL
EQLRRLQDLQVTIEVRFVTVSDRFFERIGVDFDFNVQDTVGNPTVDNSGNPVPGFGQVNL
LNGTNQNGGGGQNTGGQQGQQGQNTTNGQTGGQGVAPFSDPPTRTLLNYDTWPKKGTVVG
MASPESFTPDLDVQFRQGSFEIGVPEFGSFNANAGVNVGLAILSDIEAFFFINAAQADER
SNLMFAPKVTLFNGQVAFVTSNVSRPFVISLVPTVGNFAVGFTPVIANIPEGVSLTVSAV
ISADRRYVRLSVNPNFTNVTDVFTFSFQGGTQGGQQGQQGQQGQQGGQLGQQGGGNFGNG
VGTGVGGIGGAGGTGQGGQGGQQGQQGQQGQQGQQGGGLGTTTIQQPVVEQVTVTTTVSV
PDGGTVLLGGVKRLREGRSMAGVPILNKLPYVSRLFKNTGVGRETESLMMMVTPRIIIQE
EEEEALLGY
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcctcaaaaaaaacataatcacagttggtgttctggcttgaaggagggacct
acattgggcaaggcatttggagtactggcctgtacgacgttgatcgcagcgtcaatgtgg
ctggccaatctcggcaacacgaccaggaaggtcgctgctgatgtcgagaataacggtcag
cctgtttctgggcgtcaattacgctcagctcgttactatctgagtctggggactcagtat
tatgaacgaggtcaatacgccgaagcggtagaggtgctcgaaaaagcctctgtctctccg
ggacgactgtcctccgctgagttccgcaaaatgaacgagtacctgggcagggctcgtaca
agggcggctgctccccgggaaaaacagattgtccgagcacagtctcctgcttccgacacc
gaatacacgacgaacttttcgagtcataccggaaagtctccggaagaacagaagcaactg
gcacgacagttacttcagtccgctcgtgaagatcttaaactgaatgaactggccaaagcc
cgtcagaaggcaggccaggcagcagccatgcggctggaatacggtccgtttgaagaacgt
cccgaacaggtcctcgcagccatcgctcgcgcagaacaacgcatgcagaaaaatgctccc
attcaacaggctggcggatttgccagtcagaactcgcaggtaatgcaggtcgccggtata
gaagaaccagcgggaagcaatcccttctcaccttccgctgcaaatccatttgatggaagc
caggacagaaaactgactgaaaaagagcaggccgctgtactccttaagcaggctcgacaa
tctttaaattccggcaactatgatgatgcccgtaccctcgcattgcaggcacaggattat
gatgtagcctacaaactgtttgaagaacgccctcaacatattctgtctgaaattgaacgt
aaaaccggtactaagattttcgccggtaaatcagaaccagaacaacctgtcgcacagtct
tccgctgggtcttctgaaaaagaccaggcagctcgactgctgaagcaggctcgcgcagaa
ctgcagtcgggtcgactggattccgcacgtgctctggcacagcaggccagtcaactggat
gtcgcctatcgactgtttgatgatcgccctgaactggtgctcgacgagattaaacgcgcc
cagtctggtgccggttctcttgctgccacaggaaatacgggttctgcccagatgactgcg
gctgagggagcttccaaagaacaggctaccgaactgttacgccaggctcgcctggatatt
aagaaacgggacttcgcaggagcccgccagaaagtgcaacaggttcagggaatgaaagtt
tcttacgatctgtttgacgaccgtcctgaactggtactggcagccatcgatcggatctcc
gacgaagccgctaccatttccggaatcaaaggtctgcagcagaaccaggatgccattcgt
ccccggatcaaccgtctgatggaacaggcacaggttgccctgcagcagggtaataaagat
gaagccttgatgctggcttcctctgcacagaaactggctgaaacactgaatattgaattt
gcttctaccagcgaatctccctctgctttcatcaagcgggtggggaccagctcggcctcc
aaatttaatcctggtaatactgccagtgaaaagaacaatcctgaatatgcacgaaagctg
gttgccgctgcacgaaacgatttagcccaggggcgaatcgaagatgctcgacagaaagcc
gaagctgctcagcaggtcgatactgcctacagtctgtttgaagatcgtcccgaacaggtt
ctggcagacatccgcaatatggcgggacaacctggcggactctcgcaggaacagctgtat
gcagcggaaaatgaacgcaaaaaacagttttctcagaaactggttgcacaggcaagaaca
gatctgaaagccggtcgtattgattctgcacgggtgaacgcccaggaagcattgcgagtc
ggcgtggaattcaagcctggtgaagacagcccgcagtccattctgcgtgatctggaatcc
cggacggcagcacaacagcctgaacgggtagcccggatgaagaagagtgaagccagtgag
attgccgtgattcatcccggtgcatctgctctggaattgtataaccttgggatgcaacgc
ctgtctgaaggaaatcgggaagctgcttaccagtccttcctggccgcctaccagtctggt
gaaaagctggacaatcatcgtgctcagcagttgcaggatgcggtgcgggagctggcacct
tcacgggctgacaagatccgcctggtgaagaatcagacttcttccgacgatccggcaaat
ggttcgcaggaaccaagcaccattgatctggttcagcagaaacaggcgattgaattcagc
cgcctgcgatctgatgtgctgaacgccatctttaaagcagaaagaatgcgtgaatcggct
cctaccgacgcgttgagtattatcgatcagaccatgtcaaaagtcgaaagctccagcctg
gataaaaaatcgacggctactttgatcggttcactgcagcgaacccgtgagtccattgac
tccttccgcaagcaggtcgcacctctggaagagctgaaaaagcagaaccaggaagtcgaa
gagtatattgatgctcgcatcaaaaataagatccgggtcgaacaggaactggccgatctg
gtagagaaatttaatgaactggttgatcagcgtcgctatgcggaagcagaagtgattgcc
aaacaggccaaagatctcgatccacaaaaccctgtcaccgtcacaatggaatggaaagcc
aagttcctgagaagggatgcctccaacaatgcgatgcgtgatcgtaaggaacagaatgtc
tggaatcagttgaacgatgtggaagaatctctggcagatgcttacacacctgatatcaaa
tttggacacgatgccaaagagtgggcagaactgaccaaacgacgtgataaataccatgtc
aaaaaccataaccagaaaacggaacgtgaactgcagattgaagagagccttgatcgcccg
gtcaaccttcagtttgaaggtgagcctctgacaaatgtcatgagcaaaattcagactctc
accgggatcaacatcttcctggacagtctgggtctggaagaagaaggggttacacccagt
gctcccgtgacaatcaacgtcaatggaatcaagctgcgaagtgccttgaatctgctgctc
gaacctctgaacctgtcttacacaattgataacgaagtattaaagatcaccagccgcatc
cgtcagcaggggactctgaaaactcagacctaccctgtggctgacctggtggtaccgatt
cccaactttgccgccagtggaaacatggccgccaatccctacagtcagatgggtgcgatc
agctacggttccggcatcggcggcaatcaggctgctcctggtaacttccaggttgctgac
cctgtcatgggtggtgtacctggctccaatccctggaacaacaacggagcaacatctcag
gttgccgggggtggatccaatatcgactttgattctctgaccgaactgattgtctcaacc
gtcgaaccagattcctgggaagagatcggtggagccggcagtgtgcgtccttttgaaacc
actttgagtctggttattcgtcagacacagaaagtgcatgatgaaattgccaacctgctg
gaacagttgcgaaggctgcaggacctgcaggtaaccatcgaagttcgcttcgtcaccgtg
tctgaccggttcttcgaacgaattggggtcgactttgacttcaacgttcaggataccgtc
ggtaacccgactgtcgataactcagggaaccctgtgcccggctttggtcaggtcaacctg
ctgaatggtaccaatcagaatggtggtggtggtcagaataccggtggccaacagggtcag
cagggacaaaatacgacgaatggtcaaacgggtgggcagggagttgctcccttcagtgat
ccgccaacgcgaacattgcttaactatgacacctggccgaagaaaggtaccgttgtcggg
atggcctcacctgagtcattcactcccgacctggatgtgcagttccgccagggatcattt
gaaatcggagtacctgaattcggcagcttcaatgcaaacgccggtgtgaacgtgggtctg
gcgattctgagtgacatcgaagccttcttcttcatcaacgccgctcaggcagatgaacgg
tcaaacctgatgtttgctccgaaagtgactttgttcaacggtcaggttgcctttgtgacc
agtaacgtatcgcgaccattcgtgatcagcctggtaccaactgtaggtaactttgctgtc
gggttcacacctgtcatcgcgaatattcctgaaggggtctccttgacagtctcggctgtg
atctctgcagaccgtcgttatgtacgactctccgtcaatcctaacttcaccaacgtcacc
gacgtctttaccttctctttccagggtggtacacaaggcggccagcaaggccagcagggt
cagcaaggccagcagggtggccagctgggtcagcagggtggtggaaacttcggtaacgga
gtaggaaccggggttggtggtatcggtggtgccggcggcacaggccagggtggccagggt
ggccagcagggtcagcaaggccagcagggtcagcaaggccagcagggtggtggtctgggg
accacaacgattcagcagcctgtggtcgagcaggtgactgtgacaaccacagtcagtgtg
cccgatggtggtactgtgctcctgggtggtgtcaaacgactccgtgaaggtcgcagtatg
gccggcgttccaattctgaataaactgccgtatgtcagccgtctattcaagaataccggt
gtcggtagggaaacggaaagcctgatgatgatggtcactccccgtatcatcatccaggaa
gaagaagaggaagctctcctcggatactaa
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