Gimesia maris: GmarT_57160
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Entry
GmarT_57160 CDS
T06180
Symbol
pcrA_4
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gmr
Gimesia maris
Pathway
gmr03420
Nucleotide excision repair
gmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GmarT_57160 (pcrA_4)
03430 Mismatch repair
GmarT_57160 (pcrA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_57160 (pcrA_4)
Enzymes [BR:
gmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GmarT_57160 (pcrA_4)
DNA repair and recombination proteins [BR:
gmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GmarT_57160 (pcrA_4)
MMR (mismatch excision repair)
Other MMR factors
GmarT_57160 (pcrA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Helicase_RecD
AAA_11
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QEG19809
LinkDB
All DBs
Position
7407336..7409417
Genome browser
AA seq
693 aa
AA seq
DB search
MSEIPPQLEDLFKQLNPEQQAAACHDTGPLLIIAGAGTGKTTTLSHRVAYLIAQGIDPSR
ILLLTFSRRAANEMVRRVDALLRAMSAGRENTASARSRSIWGGTFHSTAARLLRRYGQAI
GLPDDFTIIDRSDAEDLMSALRSELDLGNNGKKFPRKGTLLEIYSRCVNTCSKLEPILER
HYPWCLEHADELKKLFQAFVDRKEKQNILDYDDLLLFWHALAADPAGGKLLRGQFEAVLV
DEYQDTNILQSGILKNICPDGEGLTVVGDDAQSIYSFRAATVRNILDFPQEYEGTTVVTL
EENYRSTQPILQATNQIIDEAHERYEKNLWSSKISGEAPCLVDCSDNNEQADFVVQQVLE
HREAGIPLNQQAVLFRASHHSLSLEVELARRNIAYHKYGGLKFIETAHVKDLMAYLRLAE
NPRDAVSGLRVLTLLPGIGQKKAQQLINLLAESQFRFDAWSEFKPPAATVEHWPLFVRLM
KNLSSPQSEKRGISAEVHQVRTFYSPLLDQQYDNATSRQRDLEQLEQVASRFSSRMSFLE
EITLDPPSSTQDVSAASGADDDDFLVLSTIHSSKGLEWDAVYVLQAADGSIPSEMSLESE
DEIDEERRLFYVALTRAKNWLYVCFPHRQYFQNRRWNQAHSYAQLTRFVSPKTISLFQRR
PAFSADALDTPQEAEIETTAEDIRKNIRNMWSA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatccccccacaactggaagaccttttcaaacagctcaatccggagcagcag
gcagccgcctgccacgatacgggcccgctgttgatcatcgccggtgcggggaccggtaaa
acgaccacactttcgcatcgggtcgcgtacctgattgcgcaaggcatcgatcccagccgg
atcctgctgctgacgttttcccgccgcgcagcgaatgaaatggtccggcgcgtcgatgcg
ctgttgcgggcgatgagcgccggccgcgagaataccgcctcggcccgatcgcggagtatc
tgggggggcacatttcactcaacggctgcgcgactgctcaggcgttacggacaggccatc
ggactacccgatgactttaccatcatcgaccgcagcgatgccgaagacttgatgagcgcc
ctccgcagtgaactcgatctgggcaataacggcaagaagtttcctcgcaaagggaccctg
ctggaaatctacagccgctgtgtgaatacgtgttccaaactggaaccgatcctcgagcga
cattatccctggtgcctggaacatgctgacgagttgaagaaactgtttcaggcgtttgtg
gatcgcaaagaaaagcagaacattctcgattacgacgacctgcttttattctggcatgcc
ctcgccgctgatcccgcggggggcaaactgttgcgaggccagttcgaagcagtactggta
gacgaataccaggacacgaacatcctgcagtcgggcattctgaaaaacatctgtccggac
ggtgaaggactgaccgtcgtcggcgacgatgcacagtcaatctattcctttcgggcggcg
accgtacggaacatcctggacttcccccaggaatacgagggaacaaccgtcgtcacgctg
gaagaaaattaccgcagcacgcaacccatcctgcaggcgacgaatcagattatcgacgaa
gcacacgaacgttacgagaaaaacctgtggtcgtccaagatcagcggggaagcgccctgc
ctggtcgactgcagtgacaataacgaacaggcggacttcgtcgtgcagcaggtgctcgaa
caccgggaagccgggattcccctgaatcagcaggcggtcctgttccgggcttcacaccac
agtctttcgctggaagttgaactggcgcgacgcaatatcgcctatcacaaatatggcggc
ttaaagtttattgaaactgcgcacgtcaaagacctgatggcgtatctgcgtctggctgaa
aatccccgcgatgccgtctcgggattgcgagtactgacgttactgccgggcattggccag
aaaaaagcacaacagctgatcaacctgctggcggaatcgcagtttcgctttgatgcctgg
tcggaattcaaaccgccggcagcgacggttgagcactggcctctgtttgtgcggctgatg
aaaaacctgagttctccccaatcagaaaaacggggcatctcggcggaagtgcatcaggtg
cgcacgttttacagtcccctgctcgaccagcaatacgataacgcgacatcgcgtcaacgg
gatctggaacagttggaacaggttgccagtcgcttcagcagtcgcatgagttttctggaa
gagattacccttgacccacccagttccacgcaggatgtctcagccgccagcggcgcggat
gacgatgatttcctggtactgagtacgattcactcgtcaaaaggtctggaatgggacgca
gtctacgtgctgcaggccgccgatggcagtattccgtcagagatgtcactggaaagcgaa
gacgaaatcgacgaagaacgccgtctgttttatgtcgcgttgacgcgggcgaaaaactgg
ctgtatgtctgctttcctcatcggcagtatttccagaatcgtcgctggaaccaggcacac
agttatgcccagctgacacggtttgtttcaccaaagacgatctcgctgtttcagcgacga
ccggcgttcagtgccgatgcgctggatactccccaggaagccgagatcgaaacgacagca
gaagacatccgcaagaacatccgcaacatgtggtctgcctga
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