Gemmata massiliana: SOIL9_05260
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Entry
SOIL9_05260 CDS
T06634
Name
(GenBank) Phage/plasmid primase, P4 family, C-terminal domain protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4213 PE=4 SV=1
KO
K06919
putative DNA primase/helicase
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SOIL9_05260
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Gene cluster
GFIT
Motif
Pfam:
DUF5906
Prim-Pol
PPV_E1_C
DO-GTPase2
Rad17
TsaE
Motif
Other DBs
NCBI-ProteinID:
VTR97819
UniProt:
A0A6P2D9G2
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Position
1:7748743..7751298
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AA seq
851 aa
AA seq
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MNGAPPDVGTRAHVRLLRARGFGVCKPDPREKMPTYEGWSARSLEADDFADGEQLGLMAG
ALSDGNRPGHSLVTLDLDSDRAVQLADKYLPRTSLAEGRPGKVRSHRSFLVPNSSIPDWA
RSTAQQAARAAEAKAGHPGPFTKSFPHHETGKEAIRFVGTGGQTVCPPSTHPSGEIREWD
GGEPGDPVVFNFRDLWDAVCELASACDCRLPSVGPRPNRPAGGSSGATGVDLITRRVLPW
LAKCDPAVSGQGGHGKTLKVARGLVRGFLLDADLALDLLLQHYNPRCAPEWSEGDLRHKV
ADAEQCAFGLPDGYLLNAQRPERASRTRSNFTGATRTERPTDNGGVPAAEPSPATETFPR
PGVGEEWNDPHRLARLFLDRYRHADRATLVQWRDQYHRWEQGAWVPVSDADLDAELARHC
REVFQADFPVRIAEAQRAAESEGRERPQKPPKVYPVTTATRANVRVNLAGLANVSDDGRA
IPFWLDGRDGPVPTAVISAPNGLFRLGDIAAGGRAFSEPTPQLFTPNALSFDVSSSAGQP
GEWLRRLEEWFNGDKNSIAGLQEWFGYFLSAETRAQKALLLVGPPRSGKGTIMHVLAELV
GHSNVASTSFASLGESFGLEDLLGKRLALIPDARLSGRTDVASVVERLLSISGEDLQSVN
RKNRPRLTARVYTRFLIATNVMPQLPDASDAIASRFHILNTPNSWLGREDPALKTKLQGE
LPAILKWAAEGWARLNRQNMIFTPNQVAERFSRELRDLSNPVMAFVRQRCYVGPDYSTDV
SEIYGAWVTWNRERGREHVPDQSIFGRDLNATLPHLRVGQRRDLARRVRVYRGISVREEA
AWGDDDASDAA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggggctcctcccgatgtgggtacgcgcgcgcacgtccgccttctccgggcgcgc
ggtttcggggtctgcaagccggacccgcgcgagaagatgcccacctacgaaggctggtcg
gcacggtcccttgaggcagacgacttcgccgacggcgagcagctcggcctcatggccggc
gctctgtcggatgggaaccggcccgggcactcgctcgtgacgctggacctcgattccgat
cgggccgtacaactggccgacaagtatcttccccgcaccagtctcgccgagggtcgcccc
ggaaaggtgcgctcgcaccggtcgtttctggtccctaacagttcgatccctgattgggca
cggagtacagcgcagcaagcggctcgcgctgccgaggcgaaggccgggcaccccggaccg
tttacgaagtcgttcccgcaccacgagacgggtaaagaggcgatccgcttcgtgggcacc
ggcggtcagaccgtgtgcccgccctcgactcacccgtccggcgagatccgggaatgggat
ggtggggagccaggcgatccggtcgtatttaacttccgtgacctctgggacgccgtgtgc
gaactcgcttcggcgtgcgactgtcgcctcccgagtgtcggtccccgcccgaatcgacca
gcgggcggatcgtccggcgcgaccggtgtagatctcattacgcggcgcgtgctcccctgg
ctcgcaaagtgtgatccggccgtttcgggccagggcgggcacgggaagactctcaaggtc
gcgcgcggtttggtacgcgggttcctgctggacgcggatctcgccctcgatttgctgctg
caacactacaacccgcggtgtgcgccggagtggtctgagggtgacttgcgtcacaaggtc
gcggacgccgagcagtgcgccttcgggttaccggacgggtacttgctcaacgcccaacga
cccgaacgagcgagtcgcacccggagcaatttcaccggcgcgactcggaccgagcgccca
actgataacggtggtgtaccagccgccgagccgtcacccgcaactgagacgtttccgcgc
ccgggcgtaggtgaggagtggaacgatccgcaccgattggcccggctgttcttggaccgg
taccggcacgcggaccgggcgacgctcgtgcagtggcgcgatcagtatcaccgctgggag
cagggcgcgtgggttccggtgagtgacgcggacctcgatgccgagttggcgcggcactgc
cgcgaggtgttccaggccgatttcccggtgcggattgccgaggcccagcgtgcggccgag
tctgaggggcgcgagcggccccagaaacccccgaaggtgtacccggtgacgaccgcaacc
cgcgcgaacgtgcgggtcaatctcgctggtctggcgaacgtttcggacgacgggcgagcg
atcccgttctggctcgatggccgcgacgggccggtgccgacggcggttatctccgcgccc
aacgggcttttccgactcggggacatcgcagcgggcgggcgcgcgttctcggaacccaca
cctcagcttttcacccctaacgccctttcgttcgacgtgtcgagttcggcgggccagccg
ggggagtggttgcgccggctcgaagagtggttcaacggggacaagaactcgattgcgggc
ctgcaggagtggttcgggtacttcctgtcagccgagacgcgtgcccagaaggcgctgctc
ctggtcggtcccccacggtccggaaaaggcacgatcatgcacgtgctcgcggaactggtc
ggccactccaacgtcgcgtccacttcgttcgcctcgctaggtgagagttttgggctcgaa
gatctgttgggcaaaaggttggcgctcattccggatgcccgtctgtcgggccggaccgac
gtcgcgtcggtcgtggagcggctcctttcgattagtggggaagatctccagagtgtgaac
cggaagaacagaccgcgcctcacggccagggtttacacgcgtttcctgattgctacgaac
gtgatgccgcagttgccggacgcgtccgatgctattgcgagccgattccacattctgaac
acgcccaactcctggttggggcgggaagatcctgccctcaagacgaaactccagggggaa
ctgcccgccatcctgaaatgggccgccgaagggtgggctcggcttaaccgtcagaacatg
atcttcacgccgaatcaggtggcggagcgcttctcgcgagagctccgcgatctttccaat
ccggtgatggcgttcgtgcggcagcgctgctacgtcggcccggactattcgacggacgtc
tccgagatttacggggcgtgggttacttggaatcgtgaacggggacgggagcacgttccc
gatcagagtatctttgggcgggatctgaatgcgaccttgccgcacctgcgcgttgggcag
cggcgcgacttggcacgacgtgttcgcgtctatcgaggcataagtgttcgcgaggaagcg
gcttggggcgacgacgacgcttccgatgcggcttag
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