Gemmata massiliana: SOIL9_06100
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Entry
SOIL9_06100 CDS
T06634
Name
(GenBank) exonuclease : Exonuclease OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2401 PE=4 SV=1: RNase_T
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gms
Gemmata massiliana
Pathway
gms03030
DNA replication
gms03430
Mismatch repair
gms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOIL9_06100
03430 Mismatch repair
SOIL9_06100
03440 Homologous recombination
SOIL9_06100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gms03032
]
SOIL9_06100
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_06100
Enzymes [BR:
gms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOIL9_06100
DNA replication proteins [BR:
gms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOIL9_06100
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOIL9_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
VTR97652
UniProt:
A0A6P2DE18
LinkDB
All DBs
Position
1:7653738..7654295
Genome browser
AA seq
185 aa
AA seq
DB search
MTPRRKKPPVPLPPLDGPFVAIDFETADNGPDSACAVGIVRVENSKIVHREAVLIRPPRE
RILFTYVHGITWPMVKSAPVFKDVWSKVAPVLEGAAFLAAHNAPFDRRVLSACCAAAELT
APALPFVCTVQLARRKWALKPANLPAVCRRLGIGLMHHDAGSDAEACARIVIAAAFPGNA
TDAAG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcgccgcaagaagccgcccgttccgctcccgccgctggacggcccgttcgtg
gcgatcgacttcgagacggccgacaacggccccgatagcgcctgcgcggtagggatagtt
cgagtggaaaactcgaagatcgttcaccgcgaagcggtgctgatccgcccgccgcgcgag
cgcattctgttcacctacgttcacggcatcacgtggccgatggtgaaaagcgcgccggtc
ttcaaagacgtgtggtcgaaggtcgcgccggtactcgaaggtgcggcgttcctcgccgcg
cacaacgccccgttcgaccggcgcgtgctgtccgcgtgctgcgccgcggcggaactgacg
gcccccgccctgcccttcgtctgcacggttcagctcgcgcgccggaagtgggcactcaaa
cccgcgaacctgcccgccgtgtgtcggcgcctcgggatcggcctgatgcaccacgacgcc
gggtcagacgccgaagcgtgtgcccggatcgtgatcgccgcggcgttcccgggcaacgcg
accgacgccgcgggttga
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