Gemmata massiliana: SOIL9_07640
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Entry
SOIL9_07640 CDS
T06634
Name
(GenBank) ribonuclease iii : Ribonuclease 3 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOIL9_07640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gms03019
]
SOIL9_07640
03009 Ribosome biogenesis [BR:
gms03009
]
SOIL9_07640
03036 Chromosome and associated proteins [BR:
gms03036
]
SOIL9_07640
Enzymes [BR:
gms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SOIL9_07640
Messenger RNA biogenesis [BR:
gms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOIL9_07640
Ribosome biogenesis [BR:
gms03009
]
Eukaryotic type
90S particles
RNase
SOIL9_07640
Prokaryotic type
rRNA processing factors
SOIL9_07640
Chromosome and associated proteins [BR:
gms03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SOIL9_07640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
VTR97351
UniProt:
A0A6P2D7N3
LinkDB
All DBs
Position
1:7462638..7463372
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AA seq
244 aa
AA seq
DB search
MPPSDTLTNNRERTVLENCQEAIGYRFLKPELLRSALTHTSSANTRAASNERLEFLGDSV
LGLVTCEQLYQRFPEYQEGDLTKVKSAVVSRKTCARFSQEIGLGDFLFLGRGVHTHGEMP
LNILANVFESLVAAIFLDGGWGAAREFILRFITPEVERVARDAISSNAKSQLQTVTQREY
GDTPRYFLLDEQGPDNNKCFKVAAQVHDERFPAAWGSTKKEAELKAAMNALAHIHGEPLP
FPPA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggacacactcactaacaaccgggaacgcacggtcctcgaaaactgccag
gaagcgatcgggtaccggtttttgaagccggaactgctccggtcggccctcacgcacacg
tccagtgcgaatacgcgggcggcgtccaacgagcggctggagttcctcggcgacagcgtg
ctggggttggtcacctgtgagcaactctatcagcggttccccgaataccaggaaggcgac
ctcacgaaagtgaagtcggccgtcgtcagccgtaaaacctgtgcgcgattcagccaggaa
atcggcctcggcgacttcctgttcctcggccgaggagtccacacccatggcgagatgccg
ctaaacattctcgccaacgtcttcgagtcgctcgtcgcggccatcttccttgatggcggc
tggggcgcggcccgcgagttcatcctgcggttcatcacgcccgaggtcgagcgcgtggcc
cgggatgccatctcctcgaacgccaagtcacagttgcaaaccgtgacgcagcgcgagtac
ggcgacaccccgcgttacttcctcctcgacgaacaggggccggacaacaacaagtgtttc
aaagtcgcggcacaggtccacgacgagcggttcccggcggcttgggggagcaccaagaag
gaagccgaactcaaggccgcaatgaacgcgctggcccacattcacggcgaaccgctcccg
ttcccgccggcctga
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